RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 MLH3Q9UHC1 1453 aa18.6■□□□□ 0.57
TMEM38A-201ENST00000187762 ABCC3O15438 1527 aa18.6■□□□□ 0.57
TMEM38A-201ENST00000187762 WWC1Q8IX03 1113 aa18.6■□□□□ 0.57
TMEM38A-201ENST00000187762 BBXQ8WY36 941 aaPredicted RBP18.6■□□□□ 0.57
TMEM38A-201ENST00000187762 CGNL1Q0VF96 1302 aa18.6■□□□□ 0.57
TMEM38A-201ENST00000187762 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
TMEM38A-201ENST00000187762 CLUAP1Q96AJ1 413 aa18.59■□□□□ 0.57
TMEM38A-201ENST00000187762 CFAP74Q9C0B2 1584 aa18.59■□□□□ 0.57
TMEM38A-201ENST00000187762 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
TMEM38A-201ENST00000187762 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
TMEM38A-201ENST00000187762 CAMSAP1Q5T5Y3 1602 aa18.59■□□□□ 0.57
TMEM38A-201ENST00000187762 RAPGEF3O95398 923 aa18.58■□□□□ 0.57
TMEM38A-201ENST00000187762 GLI2P10070 1586 aa18.58■□□□□ 0.56
TMEM38A-201ENST00000187762 DYNC1I1O14576 645 aa18.57■□□□□ 0.56
TMEM38A-201ENST00000187762 GTF2E1P29083 439 aaPredicted RBP18.57■□□□□ 0.56
TMEM38A-201ENST00000187762 SKOR2Q2VWA4 1001 aaPredicted RBP18.57■□□□□ 0.56
TMEM38A-201ENST00000187762 ANP32BQ92688 251 aaKnown RBP18.56■□□□□ 0.56
TMEM38A-201ENST00000187762 DDIT3P35638 169 aa18.55■□□□□ 0.56
TMEM38A-201ENST00000187762 TNPO1Q92973 898 aaKnown RBP18.55■□□□□ 0.56
TMEM38A-201ENST00000187762 ARHGEF28Q8N1W1 1705 aaKnown RBP18.55■□□□□ 0.56
TMEM38A-201ENST00000187762 MTHFSP49914 203 aa18.55■□□□□ 0.56
TMEM38A-201ENST00000187762 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
TMEM38A-201ENST00000187762 C22orf23Q9BZE7 217 aa18.55■□□□□ 0.56
TMEM38A-201ENST00000187762 ZSCAN20P17040 1043 aaPredicted RBP18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 HSCBQ8IWL3 235 aa18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 PANK1Q8TE04 598 aa18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 NCOA3Q9Y6Q9 1424 aa18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 TULP4Q9NRJ4 1543 aa18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 ZNF500O60304 480 aaPredicted RBP18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 TCP11L2Q8N4U5 519 aa18.54■□□□□ 0.56
TMEM38A-201ENST00000187762 NCLP19338 710 aaKnown RBP18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 CANXP27824 592 aaKnown RBP18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 GBP4Q96PP9 640 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 RPGRIP1LQ68CZ1 1315 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 RUNDC1Q96C34 613 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 CCDC94Q9BW85 323 aaPredicted RBP18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 COG6Q9Y2V7 657 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 IQSEC2Q5JU85 1478 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 NEXMIFQ5QGS0 1516 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 PDIA4P13667 645 aaKnown RBP18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 HS1BP3Q53T59 392 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 CABP2Q9NPB3 220 aa18.53■□□□□ 0.56
TMEM38A-201ENST00000187762 USP32Q8NFA0 1604 aa18.52■□□□□ 0.56
TMEM38A-201ENST00000187762 NGEFQ8N5V2 710 aa18.52■□□□□ 0.56
TMEM38A-201ENST00000187762 PIK3C2BO00750 1634 aa18.52■□□□□ 0.55
TMEM38A-201ENST00000187762 PTMSP20962 102 aa18.52■□□□□ 0.55
TMEM38A-201ENST00000187762 XPCQ01831 940 aaPredicted RBP18.52■□□□□ 0.55
TMEM38A-201ENST00000187762 NOL7Q9UMY1 257 aaKnown RBP18.51■□□□□ 0.55
TMEM38A-201ENST00000187762 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
TMEM38A-201ENST00000187762 OSCARQ8IYS5 282 aa18.5■□□□□ 0.55
TMEM38A-201ENST00000187762 TNNQ9UQP3 1299 aa18.5■□□□□ 0.55
TMEM38A-201ENST00000187762 MFAP1P55081 439 aaKnown RBP18.5■□□□□ 0.55
TMEM38A-201ENST00000187762 PMFBP1Q8TBY8 1022 aa18.5■□□□□ 0.55
TMEM38A-201ENST00000187762 DIP2CQ9Y2E4 1556 aa18.5■□□□□ 0.55
TMEM38A-201ENST00000187762 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 PPP4R3BQ5MIZ7 849 aa18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 BCL2L13Q9BXK5 485 aa18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 MYO5BQ9ULV0 1848 aa18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 NINLQ9Y2I6 1382 aa18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 STK26Q9P289 416 aa18.49■□□□□ 0.55
TMEM38A-201ENST00000187762 CIZ1Q9ULV3 898 aaPredicted RBP18.48■□□□□ 0.55
TMEM38A-201ENST00000187762 VGFO15240 615 aaPredicted RBP18.48■□□□□ 0.55
TMEM38A-201ENST00000187762 RAB3GAP1Q15042 981 aa18.48■□□□□ 0.55
TMEM38A-201ENST00000187762 NAP1L2Q9ULW6 460 aaPredicted RBP18.48■□□□□ 0.55
TMEM38A-201ENST00000187762 ANKRD36BQ8N2N9 1353 aa18.48■□□□□ 0.55
TMEM38A-201ENST00000187762 IDI1Q13907 227 aa18.47■□□□□ 0.55
TMEM38A-201ENST00000187762 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
TMEM38A-201ENST00000187762 CSPP1Q1MSJ5 1256 aa18.47■□□□□ 0.55
TMEM38A-201ENST00000187762 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
TMEM38A-201ENST00000187762 IBTKQ9P2D0 1353 aaPredicted RBP18.47■□□□□ 0.55
TMEM38A-201ENST00000187762 SASS6Q6UVJ0 657 aa18.46■□□□□ 0.55
TMEM38A-201ENST00000187762 CFAP53Q96M91 514 aa18.46■□□□□ 0.55
TMEM38A-201ENST00000187762 SMC5Q8IY18 1101 aa18.46■□□□□ 0.55
TMEM38A-201ENST00000187762 U2AF1L5P0DN76 240 aaPredicted RBP18.45■□□□□ 0.54
TMEM38A-201ENST00000187762 U2AF1Q01081 240 aaKnown RBP eCLIP18.45■□□□□ 0.54
TMEM38A-201ENST00000187762 RLBP1P12271 317 aa18.45■□□□□ 0.54
TMEM38A-201ENST00000187762 PCDHB15Q9Y5E8 787 aa18.45■□□□□ 0.54
TMEM38A-201ENST00000187762 KIF20AO95235 890 aa18.44■□□□□ 0.54
TMEM38A-201ENST00000187762 GTPBP4Q9BZE4 634 aaKnown RBP18.44■□□□□ 0.54
TMEM38A-201ENST00000187762 NEO1Q92859 1461 aa18.44■□□□□ 0.54
TMEM38A-201ENST00000187762 A0A1W2PP64 1363 aa18.43■□□□□ 0.54
TMEM38A-201ENST00000187762 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
TMEM38A-201ENST00000187762 WDR63Q8IWG1 891 aa18.43■□□□□ 0.54
TMEM38A-201ENST00000187762 RICTORQ6R327 1708 aa18.42■□□□□ 0.54
TMEM38A-201ENST00000187762 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
TMEM38A-201ENST00000187762 PDLIM2Q96JY6 352 aa18.42■□□□□ 0.54
TMEM38A-201ENST00000187762 ZKSCAN5Q9Y2L8 839 aa18.42■□□□□ 0.54
TMEM38A-201ENST00000187762 SNX21Q969T3 373 aa18.42■□□□□ 0.54
TMEM38A-201ENST00000187762 GGNBP2Q9H3C7 697 aa18.42■□□□□ 0.54
TMEM38A-201ENST00000187762 CHMP4BQ9H444 224 aaKnown RBP18.41■□□□□ 0.54
TMEM38A-201ENST00000187762 KLHL40Q2TBA0 621 aa18.4■□□□□ 0.54
TMEM38A-201ENST00000187762 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
TMEM38A-201ENST00000187762 NSD2O96028 1365 aa18.4■□□□□ 0.54
TMEM38A-201ENST00000187762 LETM1O95202 739 aaPredicted RBP18.39■□□□□ 0.54
TMEM38A-201ENST00000187762 CCDC27Q2M243 656 aa18.39■□□□□ 0.54
TMEM38A-201ENST00000187762 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.54
TMEM38A-201ENST00000187762 ADGRB2O60241 1585 aa18.39■□□□□ 0.53
TMEM38A-201ENST00000187762 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms