RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 ZNF396Q96N95 335 aaPredicted RBP15.05■□□□□ -0
LMCD1-201ENST00000157600 SLC52A1Q9NWF4 448 aa15.05■□□□□ -0
LMCD1-201ENST00000157600 TXLNAP40222 546 aa15.05■□□□□ -0
LMCD1-201ENST00000157600 ATF3P18847 181 aa15.05■□□□□ -0
LMCD1-201ENST00000157600 MNS1Q8NEH6 495 aa15.04■□□□□ -0
LMCD1-201ENST00000157600 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
LMCD1-201ENST00000157600 CAVIN1Q6NZI2 390 aaKnown RBP15.04■□□□□ -0
LMCD1-201ENST00000157600 ZNF771Q7L3S4 317 aaPredicted RBP15.04■□□□□ -0
LMCD1-201ENST00000157600 PRM3Q9NNZ6 103 aa15.04■□□□□ -0
LMCD1-201ENST00000157600 LUC7LQ9NQ29 371 aaKnown RBP15.04■□□□□ -0
LMCD1-201ENST00000157600 EPS15P42566 896 aa15.04■□□□□ -0
LMCD1-201ENST00000157600 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
LMCD1-201ENST00000157600 TOPBP1Q92547 1522 aa15.03■□□□□ -0
LMCD1-201ENST00000157600 AEBP1Q8IUX7 1158 aa15.03■□□□□ -0
LMCD1-201ENST00000157600 SMARCE1Q969G3 411 aa15.03■□□□□ -0
LMCD1-201ENST00000157600 ATAD2Q6PL18 1390 aa15.03■□□□□ -0
LMCD1-201ENST00000157600 IFT57Q9NWB7 429 aa15.03■□□□□ -0
LMCD1-201ENST00000157600 NCBP3Q53F19 620 aaKnown RBP15.02■□□□□ -0
LMCD1-201ENST00000157600 GNAI2P04899 355 aa15.02■□□□□ -0
LMCD1-201ENST00000157600 ZNF592Q92610 1267 aa15.02■□□□□ -0
LMCD1-201ENST00000157600 LNPKQ9C0E8 428 aa15.02■□□□□ -0
LMCD1-201ENST00000157600 CTTNBP2Q8WZ74 1663 aa15.02□□□□□ -0.01
LMCD1-201ENST00000157600 ERBINQ96RT1 1412 aa15.02□□□□□ -0.01
LMCD1-201ENST00000157600 EPRSP07814 1512 aaKnown RBP15.02□□□□□ -0.01
LMCD1-201ENST00000157600 FAM135AQ9P2D6 1515 aa15.02□□□□□ -0.01
LMCD1-201ENST00000157600 NUTM2FA1L443 756 aa15.02□□□□□ -0.01
LMCD1-201ENST00000157600 SDF4Q9BRK5 362 aa15.02□□□□□ -0.01
LMCD1-201ENST00000157600 CIZ1Q9ULV3 898 aaPredicted RBP15.02□□□□□ -0.01
LMCD1-201ENST00000157600 ARID3AQ99856 593 aa15.01□□□□□ -0.01
LMCD1-201ENST00000157600 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.01□□□□□ -0.01
LMCD1-201ENST00000157600 RBM33Q96EV2 1170 aaKnown RBP15.01□□□□□ -0.01
LMCD1-201ENST00000157600 PLEKHO1Q53GL0 409 aaPredicted RBP15.01□□□□□ -0.01
LMCD1-201ENST00000157600 FILIP1LQ4L180 1135 aa15□□□□□ -0.01
LMCD1-201ENST00000157600 THOC2Q8NI27 1593 aaKnown RBP15□□□□□ -0.01
LMCD1-201ENST00000157600 NFKBIBQ15653 356 aa15□□□□□ -0.01
LMCD1-201ENST00000157600 DACH1Q9UI36 760 aa15□□□□□ -0.01
LMCD1-201ENST00000157600 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.99□□□□□ -0.01
LMCD1-201ENST00000157600 MTHFSP49914 203 aa14.99□□□□□ -0.01
LMCD1-201ENST00000157600 ODF2Q5BJF6 829 aa14.99□□□□□ -0.01
LMCD1-201ENST00000157600 GNL3LQ9NVN8 582 aaKnown RBP14.99□□□□□ -0.01
LMCD1-201ENST00000157600 CT47A1Q5JQC4 288 aaPredicted RBP14.99□□□□□ -0.01
LMCD1-201ENST00000157600 KIF6Q6ZMV9 814 aa14.99□□□□□ -0.01
LMCD1-201ENST00000157600 PCF11O94913 1555 aaKnown RBP14.98□□□□□ -0.01
LMCD1-201ENST00000157600 CCDC66A2RUB6 948 aa14.98□□□□□ -0.01
LMCD1-201ENST00000157600 WDR33Q9C0J8 1336 aaKnown RBP14.98□□□□□ -0.01
LMCD1-201ENST00000157600 PPP2R1AP30153 589 aa14.98□□□□□ -0.01
LMCD1-201ENST00000157600 TCP11L2Q8N4U5 519 aa14.98□□□□□ -0.01
LMCD1-201ENST00000157600 RRP12Q5JTH9 1297 aaKnown RBP14.97□□□□□ -0.01
LMCD1-201ENST00000157600 KIF21AQ7Z4S6 1674 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 OFD1O75665 1012 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 CDKL5O76039 1030 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 BIVM-ERCC5R4GMW8 1640 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 CCDC192P0DO97 292 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 ZSCAN25Q6NSZ9 544 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 TSPY26PQ9H489 355 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 POGZQ7Z3K3 1410 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 WDR97A6NE52 1622 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 FSD1Q9BTV5 496 aa14.97□□□□□ -0.01
LMCD1-201ENST00000157600 PRG4Q92954 1404 aaPredicted RBP14.97□□□□□ -0.01
LMCD1-201ENST00000157600 ADAMTS8Q9UP79 889 aa14.96□□□□□ -0.01
LMCD1-201ENST00000157600 TRAK2O60296 914 aa14.96□□□□□ -0.01
LMCD1-201ENST00000157600 STIM1Q13586 685 aa14.96□□□□□ -0.01
LMCD1-201ENST00000157600 PANK1Q8TE04 598 aa14.96□□□□□ -0.01
LMCD1-201ENST00000157600 FOXD4L6Q3SYB3 417 aaPredicted RBP14.96□□□□□ -0.02
LMCD1-201ENST00000157600 FOXD4L3Q6VB84 417 aaPredicted RBP14.96□□□□□ -0.02
LMCD1-201ENST00000157600 KRT32Q14532 448 aa14.95□□□□□ -0.02
LMCD1-201ENST00000157600 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
LMCD1-201ENST00000157600 R3HCC1Q9Y3T6 440 aaKnown RBP14.95□□□□□ -0.02
LMCD1-201ENST00000157600 IQCEQ6IPM2 695 aa14.95□□□□□ -0.02
LMCD1-201ENST00000157600 WASHC4Q2M389 1173 aa14.95□□□□□ -0.02
LMCD1-201ENST00000157600 CFAP45Q9UL16 551 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 PLEKHH1Q9ULM0 1364 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 MAGEC2Q9UBF1 373 aaPredicted RBP14.94□□□□□ -0.02
LMCD1-201ENST00000157600 ABCC11Q96J66 1382 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 TRIM22Q8IYM9 498 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 NACAP1Q9BZK3 213 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 TRIM5Q9C035 493 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 ZNHIT6Q9NWK9 470 aaKnown RBP14.94□□□□□ -0.02
LMCD1-201ENST00000157600 TWISTNBQ3B726 338 aaPredicted RBP14.94□□□□□ -0.02
LMCD1-201ENST00000157600 LRRCC1Q9C099 1032 aa14.94□□□□□ -0.02
LMCD1-201ENST00000157600 HMOX1P09601 288 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 FAM13BQ9NYF5 915 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 NEUROD6Q96NK8 337 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 CYP46A1Q9Y6A2 500 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 NAP1L1P55209 391 aaKnown RBP14.93□□□□□ -0.02
LMCD1-201ENST00000157600 ABCA10Q8WWZ4 1543 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 SLC4A3P48751 1232 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 NLRP6P59044 892 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 ATF7IPQ6VMQ6 1270 aa14.93□□□□□ -0.02
LMCD1-201ENST00000157600 KIAA0586Q9BVV6 1533 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 CCDC158Q5M9N0 1113 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 ERLIN2O94905 339 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 SURF6O75683 361 aaKnown RBP14.92□□□□□ -0.02
LMCD1-201ENST00000157600 NEK4P51957 841 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 EIF2AK4Q9P2K8 1649 aaKnown RBP14.92□□□□□ -0.02
LMCD1-201ENST00000157600 CBFA2T2O43439 604 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 KRT85P78386 507 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 CAGE1Q8TC20 777 aa14.92□□□□□ -0.02
LMCD1-201ENST00000157600 ZNF644Q9H582 1327 aaPredicted RBP14.91□□□□□ -0.02
LMCD1-201ENST00000157600 DHX29Q7Z478 1369 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms