RNA–Protein interactions for RNA: ENST00000013034.3

NME1-201, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3 BASIC

Gene NME1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-201ENST00000013034 SPATA31A5Q5VU36 1347 aa16.49■□□□□ 0.23
NME1-201ENST00000013034 SPATA31A7Q8IWB4 1347 aa16.49■□□□□ 0.23
NME1-201ENST00000013034 PRR36Q9H6K5 1346 aa16.49■□□□□ 0.23
NME1-201ENST00000013034 HRCP23327 699 aa16.48■□□□□ 0.23
NME1-201ENST00000013034 ATP7BP35670 1465 aa16.48■□□□□ 0.23
NME1-201ENST00000013034 TNS1Q9HBL0 1735 aaKnown RBP16.48■□□□□ 0.23
NME1-201ENST00000013034 PSDA5PKW4 1024 aaPredicted RBP16.47■□□□□ 0.23
NME1-201ENST00000013034 HIRIP3Q9BW71 556 aaPredicted RBP16.47■□□□□ 0.23
NME1-201ENST00000013034 TRAK1Q9UPV9 953 aa16.47■□□□□ 0.23
NME1-201ENST00000013034 MINK1Q8N4C8 1332 aaPredicted RBP16.46■□□□□ 0.23
NME1-201ENST00000013034 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
NME1-201ENST00000013034 ITSN1Q15811 1721 aa16.45■□□□□ 0.22
NME1-201ENST00000013034 TRIM26Q12899 539 aaPredicted RBP16.45■□□□□ 0.22
NME1-201ENST00000013034 PRDM11Q9NQV5 511 aa16.45■□□□□ 0.22
NME1-201ENST00000013034 PHRF1Q9P1Y6 1649 aaKnown RBP16.45■□□□□ 0.22
NME1-201ENST00000013034 EN1Q05925 392 aaPredicted RBP16.44■□□□□ 0.22
NME1-201ENST00000013034 NGDNQ8NEJ9 315 aaKnown RBP16.44■□□□□ 0.22
NME1-201ENST00000013034 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
NME1-201ENST00000013034 PARD3Q8TEW0 1356 aa16.42■□□□□ 0.22
NME1-201ENST00000013034 KIAA0232Q92628 1395 aa16.42■□□□□ 0.22
NME1-201ENST00000013034 RAB3GAP2Q9H2M9 1393 aa16.42■□□□□ 0.22
NME1-201ENST00000013034 PAK3O75914 559 aaPredicted RBP16.42■□□□□ 0.22
NME1-201ENST00000013034 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
NME1-201ENST00000013034 SPATA31A1Q5TZJ5 1347 aa16.42■□□□□ 0.22
NME1-201ENST00000013034 FAM182BQ5T319 152 aa16.41■□□□□ 0.22
NME1-201ENST00000013034 R3HDM1Q15032 1099 aaKnown RBP16.4■□□□□ 0.22
NME1-201ENST00000013034 TOPAZ1Q8N9V7 1692 aa16.4■□□□□ 0.22
NME1-201ENST00000013034 NRKQ7Z2Y5 1582 aa16.38■□□□□ 0.21
NME1-201ENST00000013034 SSH2Q76I76 1423 aa16.38■□□□□ 0.21
NME1-201ENST00000013034 FAM196AQ6ZSG2 479 aa16.38■□□□□ 0.21
NME1-201ENST00000013034 DCAF11Q8TEB1 546 aa16.38■□□□□ 0.21
NME1-201ENST00000013034 POLR3AO14802 1390 aaPredicted RBP16.38■□□□□ 0.21
NME1-201ENST00000013034 EZH2Q15910 746 aaKnown RBP16.37■□□□□ 0.21
NME1-201ENST00000013034 RREB1Q92766 1687 aa16.37■□□□□ 0.21
NME1-201ENST00000013034 CHRNA2Q15822 529 aa16.36■□□□□ 0.21
NME1-201ENST00000013034 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
NME1-201ENST00000013034 CAMKK2Q96RR4 588 aa16.36■□□□□ 0.21
NME1-201ENST00000013034 STRN4Q9NRL3 753 aa16.36■□□□□ 0.21
NME1-201ENST00000013034 KDM2AQ9Y2K7 1162 aa16.36■□□□□ 0.21
NME1-201ENST00000013034 BARGINQ6ZT62 677 aa16.35■□□□□ 0.21
NME1-201ENST00000013034 LMO7Q8WWI1 1683 aa16.34■□□□□ 0.21
NME1-201ENST00000013034 TRIM37O94972 964 aa16.34■□□□□ 0.21
NME1-201ENST00000013034 CPDO75976 1380 aa16.34■□□□□ 0.21
NME1-201ENST00000013034 ZC3H6P61129 1189 aaKnown RBP16.33■□□□□ 0.2
NME1-201ENST00000013034 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.2
NME1-201ENST00000013034 USP19O94966 1318 aa16.33■□□□□ 0.2
NME1-201ENST00000013034 NUP188Q5SRE5 1749 aa16.33■□□□□ 0.2
NME1-201ENST00000013034 APBA3O96018 575 aa16.32■□□□□ 0.2
NME1-201ENST00000013034 CAMTA1Q9Y6Y1 1673 aa16.31■□□□□ 0.2
NME1-201ENST00000013034 ACEP12821 1306 aa16.31■□□□□ 0.2
NME1-201ENST00000013034 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
NME1-201ENST00000013034 KIAA1210Q9ULL0 1709 aa16.31■□□□□ 0.2
NME1-201ENST00000013034 TCP11L2Q8N4U5 519 aa16.3■□□□□ 0.2
NME1-201ENST00000013034 CDK19Q9BWU1 502 aa16.3■□□□□ 0.2
NME1-201ENST00000013034 USP35Q9P2H5 1018 aa16.3■□□□□ 0.2
NME1-201ENST00000013034 CCDC61Q9Y6R9 512 aa16.3■□□□□ 0.2
NME1-201ENST00000013034 PARP4Q9UKK3 1724 aaKnown RBP16.29■□□□□ 0.2
NME1-201ENST00000013034 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
NME1-201ENST00000013034 EVA1CP58658 441 aa16.29■□□□□ 0.2
NME1-201ENST00000013034 NBPF8Q3BBV2 869 aa16.29■□□□□ 0.2
NME1-201ENST00000013034 NUTM2GQ5VZR2 741 aa16.29■□□□□ 0.2
NME1-201ENST00000013034 THRAP3Q9Y2W1 955 aaKnown RBP16.29■□□□□ 0.2
NME1-201ENST00000013034 COL5A2P05997 1499 aaPredicted RBP16.29■□□□□ 0.2
NME1-201ENST00000013034 BRD4O60885 1362 aaPredicted RBP16.28■□□□□ 0.2
NME1-201ENST00000013034 LARP1Q6PKG0 1096 aaKnown RBP16.28■□□□□ 0.2
NME1-201ENST00000013034 C11orf95C9JLR9 678 aaPredicted RBP16.27■□□□□ 0.2
NME1-201ENST00000013034 NBPF14Q5TI25 921 aa16.27■□□□□ 0.2
NME1-201ENST00000013034 ABTB2Q8N961 1025 aa16.27■□□□□ 0.2
NME1-201ENST00000013034 OVOS2A0A0G2JMS6 1433 aa16.27■□□□□ 0.19
NME1-201ENST00000013034 OVOS2A0A0J9YW53 1432 aa16.27■□□□□ 0.19
NME1-201ENST00000013034 OVOS2Q6IE36 1432 aa16.27■□□□□ 0.19
NME1-201ENST00000013034 CRB1P82279 1406 aa16.26■□□□□ 0.19
NME1-201ENST00000013034 PPIP5K1Q6PFW1 1433 aa16.26■□□□□ 0.19
NME1-201ENST00000013034 RGPD3A6NKT7 1758 aaPredicted RBP16.26■□□□□ 0.19
NME1-201ENST00000013034 RGPD4Q7Z3J3 1758 aa16.26■□□□□ 0.19
NME1-201ENST00000013034 NLRP13Q86W25 1043 aa16.25■□□□□ 0.19
NME1-201ENST00000013034 SLIT3O75094 1523 aa16.24■□□□□ 0.19
NME1-201ENST00000013034 LRRC37A3O60309 1634 aa16.23■□□□□ 0.19
NME1-201ENST00000013034 PEAK1Q9H792 1746 aa16.23■□□□□ 0.19
NME1-201ENST00000013034 GCP02774 474 aa16.23■□□□□ 0.19
NME1-201ENST00000013034 NINLQ9Y2I6 1382 aa16.23■□□□□ 0.19
NME1-201ENST00000013034 USP6P35125 1406 aa16.21■□□□□ 0.19
NME1-201ENST00000013034 SRPK2P78362 688 aaKnown RBP16.21■□□□□ 0.19
NME1-201ENST00000013034 SPON1Q9HCB6 807 aa16.21■□□□□ 0.19
NME1-201ENST00000013034 AATKQ6ZMQ8 1374 aa16.21■□□□□ 0.19
NME1-201ENST00000013034 CENPJQ9HC77 1338 aaPredicted RBP16.2■□□□□ 0.18
NME1-201ENST00000013034 YY1P25490 414 aa16.2■□□□□ 0.18
NME1-201ENST00000013034 PPP1R1BQ9UD71 204 aaPredicted RBP16.2■□□□□ 0.18
NME1-201ENST00000013034 KCNQ2O43526 872 aa16.19■□□□□ 0.18
NME1-201ENST00000013034 QRICH2Q9H0J4 1663 aa16.18■□□□□ 0.18
NME1-201ENST00000013034 BCL9O00512 1426 aa16.18■□□□□ 0.18
NME1-201ENST00000013034 WNK3Q9BYP7 1800 aa16.17■□□□□ 0.18
NME1-201ENST00000013034 PLSCR1O15162 318 aa16.17■□□□□ 0.18
NME1-201ENST00000013034 CPSF1Q10570 1443 aaKnown RBP16.17■□□□□ 0.18
NME1-201ENST00000013034 PIK3C2AO00443 1686 aa16.16■□□□□ 0.18
NME1-201ENST00000013034 DDB1Q16531 1140 aa16.16■□□□□ 0.18
NME1-201ENST00000013034 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
NME1-201ENST00000013034 CABP2Q9NPB3 220 aa16.16■□□□□ 0.18
NME1-201ENST00000013034 CASZ1Q86V15 1759 aa16.15■□□□□ 0.18
NME1-201ENST00000013034 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 293.6 ms