RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 PSME1Q06323 249 aa14.06□□□□□ -0.16
CD4-201ENST00000011653 PUS7Q96PZ0 661 aaKnown RBP14.06□□□□□ -0.16
CD4-201ENST00000011653 CHD2O14647 1828 aaKnown RBP14.05□□□□□ -0.16
CD4-201ENST00000011653 ATP7BP35670 1465 aa14.05□□□□□ -0.16
CD4-201ENST00000011653 PARD3Q8TEW0 1356 aa14.04□□□□□ -0.16
CD4-201ENST00000011653 MTHFSP49914 203 aa14.04□□□□□ -0.16
CD4-201ENST00000011653 DMRT2Q9Y5R5 561 aa14.04□□□□□ -0.16
CD4-201ENST00000011653 KNDC1Q76NI1 1749 aa14.03□□□□□ -0.16
CD4-201ENST00000011653 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
CD4-201ENST00000011653 ZBED9Q6R2W3 1325 aa14.03□□□□□ -0.16
CD4-201ENST00000011653 RRS1Q15050 365 aaKnown RBP14.03□□□□□ -0.16
CD4-201ENST00000011653 CCDC136Q96JN2 1154 aa14.03□□□□□ -0.16
CD4-201ENST00000011653 STRCQ7RTU9 1775 aa14.02□□□□□ -0.16
CD4-201ENST00000011653 ABTB2Q8N961 1025 aa14.02□□□□□ -0.16
CD4-201ENST00000011653 COG3Q96JB2 828 aa14.02□□□□□ -0.16
CD4-201ENST00000011653 CD163L1Q9NR16 1453 aa14.02□□□□□ -0.16
CD4-201ENST00000011653 NLRP6P59044 892 aa14.02□□□□□ -0.17
CD4-201ENST00000011653 ZNF692Q9BU19 519 aaPredicted RBP14.02□□□□□ -0.17
CD4-201ENST00000011653 ADGRL3Q9HAR2 1447 aa14.02□□□□□ -0.17
CD4-201ENST00000011653 TTC21BQ7Z4L5 1316 aa14.02□□□□□ -0.17
CD4-201ENST00000011653 PPP4R2Q9NY27 417 aa14.01□□□□□ -0.17
CD4-201ENST00000011653 RGPD8O14715 1765 aaPredicted RBP14.01□□□□□ -0.17
CD4-201ENST00000011653 PLEKHG3A1L390 1219 aa14.01□□□□□ -0.17
CD4-201ENST00000011653 WDR43Q15061 677 aaKnown RBP eCLIP14.01□□□□□ -0.17
CD4-201ENST00000011653 NINLQ9Y2I6 1382 aa14.01□□□□□ -0.17
CD4-201ENST00000011653 MSH6P52701 1360 aa14.01□□□□□ -0.17
CD4-201ENST00000011653 NKTRP30414 1462 aaKnown RBP14□□□□□ -0.17
CD4-201ENST00000011653 CCDC146Q8IYE0 955 aa14□□□□□ -0.17
CD4-201ENST00000011653 U2SURPO15042 1029 aaKnown RBP13.99□□□□□ -0.17
CD4-201ENST00000011653 PNISRQ8TF01 805 aaKnown RBP13.99□□□□□ -0.17
CD4-201ENST00000011653 EMILIN1Q9Y6C2 1016 aa13.99□□□□□ -0.17
CD4-201ENST00000011653 CADPS2Q86UW7 1296 aa13.99□□□□□ -0.17
CD4-201ENST00000011653 TULP1O00294 542 aaPredicted RBP13.98□□□□□ -0.17
CD4-201ENST00000011653 NALCNQ8IZF0 1738 aa13.98□□□□□ -0.17
CD4-201ENST00000011653 ADAMTS8Q9UP79 889 aa13.98□□□□□ -0.17
CD4-201ENST00000011653 STRCP1A6NGW2 1772 aa13.98□□□□□ -0.17
CD4-201ENST00000011653 FANCIQ9NVI1 1328 aa13.97□□□□□ -0.17
CD4-201ENST00000011653 BRD4O60885 1362 aaPredicted RBP13.97□□□□□ -0.17
CD4-201ENST00000011653 KRT28Q7Z3Y7 464 aa13.97□□□□□ -0.17
CD4-201ENST00000011653 CPSF1Q10570 1443 aaKnown RBP13.96□□□□□ -0.17
CD4-201ENST00000011653 PIP4K2BP78356 416 aa13.96□□□□□ -0.17
CD4-201ENST00000011653 NEUROD2Q15784 382 aa13.96□□□□□ -0.17
CD4-201ENST00000011653 EDC4Q6P2E9 1401 aaKnown RBP13.96□□□□□ -0.18
CD4-201ENST00000011653 SLAIN2Q9P270 581 aa13.95□□□□□ -0.18
CD4-201ENST00000011653 USP6P35125 1406 aa13.95□□□□□ -0.18
CD4-201ENST00000011653 LTV1Q96GA3 475 aaPredicted RBP13.95□□□□□ -0.18
CD4-201ENST00000011653 CFAP53Q96M91 514 aa13.95□□□□□ -0.18
CD4-201ENST00000011653 U2AF1L5P0DN76 240 aaPredicted RBP13.95□□□□□ -0.18
CD4-201ENST00000011653 U2AF1Q01081 240 aaKnown RBP eCLIP13.95□□□□□ -0.18
CD4-201ENST00000011653 CABLES1Q8TDN4 633 aa13.94□□□□□ -0.18
CD4-201ENST00000011653 USP32Q8NFA0 1604 aa13.94□□□□□ -0.18
CD4-201ENST00000011653 PODXL2Q9NZ53 605 aa13.93□□□□□ -0.18
CD4-201ENST00000011653 CDC42BPGQ6DT37 1551 aa13.93□□□□□ -0.18
CD4-201ENST00000011653 POLKQ9UBT6 870 aa13.93□□□□□ -0.18
CD4-201ENST00000011653 ADGRB2O60241 1585 aa13.93□□□□□ -0.18
CD4-201ENST00000011653 C1orf167Q5SNV9 1468 aa13.93□□□□□ -0.18
CD4-201ENST00000011653 NPC1L1Q9UHC9 1359 aa13.93□□□□□ -0.18
CD4-201ENST00000011653 LRRC7Q96NW7 1537 aa13.92□□□□□ -0.18
CD4-201ENST00000011653 MSH5O43196 834 aa13.91□□□□□ -0.18
CD4-201ENST00000011653 AMPHP49418 695 aa13.91□□□□□ -0.18
CD4-201ENST00000011653 RRP7AQ9Y3A4 280 aaKnown RBP13.91□□□□□ -0.18
CD4-201ENST00000011653 ANKARQ7Z5J8 1434 aa13.91□□□□□ -0.18
CD4-201ENST00000011653 HMOX1P09601 288 aa13.91□□□□□ -0.18
CD4-201ENST00000011653 BRINP3Q76B58 766 aa13.91□□□□□ -0.18
CD4-201ENST00000011653 NWD1Q149M9 1564 aa13.91□□□□□ -0.18
CD4-201ENST00000011653 ZC3H6P61129 1189 aaKnown RBP13.9□□□□□ -0.18
CD4-201ENST00000011653 HAP1P54257 671 aaPredicted RBP13.9□□□□□ -0.18
CD4-201ENST00000011653 NSD2O96028 1365 aa13.9□□□□□ -0.18
CD4-201ENST00000011653 SMG6Q86US8 1419 aaKnown RBP13.9□□□□□ -0.18
CD4-201ENST00000011653 FMN2Q9NZ56 1722 aa13.9□□□□□ -0.18
CD4-201ENST00000011653 HSP90AB2PQ58FF8 381 aa13.89□□□□□ -0.19
CD4-201ENST00000011653 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
CD4-201ENST00000011653 MST1RQ04912 1400 aa13.89□□□□□ -0.19
CD4-201ENST00000011653 B4GALNT3Q6L9W6 998 aa13.89□□□□□ -0.19
CD4-201ENST00000011653 ITSN1Q15811 1721 aa13.89□□□□□ -0.19
CD4-201ENST00000011653 DIAPH1O60610 1272 aaKnown RBP13.88□□□□□ -0.19
CD4-201ENST00000011653 TTC21AQ8NDW8 1320 aa13.88□□□□□ -0.19
CD4-201ENST00000011653 APAF1O14727 1248 aa13.88□□□□□ -0.19
CD4-201ENST00000011653 NUDCQ9Y266 331 aa13.87□□□□□ -0.19
CD4-201ENST00000011653 MAP3K19Q56UN5 1328 aa13.87□□□□□ -0.19
CD4-201ENST00000011653 NPHP3Q7Z494 1330 aa13.87□□□□□ -0.19
CD4-201ENST00000011653 UBAP1LF5GYI3 381 aa13.86□□□□□ -0.19
CD4-201ENST00000011653 CHRNA2Q15822 529 aa13.84□□□□□ -0.19
CD4-201ENST00000011653 TOPAZ1Q8N9V7 1692 aa13.84□□□□□ -0.19
CD4-201ENST00000011653 GCP02774 474 aa13.84□□□□□ -0.19
CD4-201ENST00000011653 ARXQ96QS3 562 aa13.83□□□□□ -0.2
CD4-201ENST00000011653 USHBP1Q8N6Y0 703 aa13.83□□□□□ -0.2
CD4-201ENST00000011653 SSH2Q76I76 1423 aa13.82□□□□□ -0.2
CD4-201ENST00000011653 AKAP12Q02952 1782 aa13.82□□□□□ -0.2
CD4-201ENST00000011653 KIF20BQ96Q89 1820 aa13.82□□□□□ -0.2
CD4-201ENST00000011653 MON2Q7Z3U7 1717 aa13.82□□□□□ -0.2
CD4-201ENST00000011653 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
CD4-201ENST00000011653 CDCA7LQ96GN5 454 aa13.81□□□□□ -0.2
CD4-201ENST00000011653 KCNA4P22459 653 aa13.81□□□□□ -0.2
CD4-201ENST00000011653 EIF4A2Q14240 407 aaKnown RBP13.81□□□□□ -0.2
CD4-201ENST00000011653 MAP2P11137 1827 aaKnown RBP13.81□□□□□ -0.2
CD4-201ENST00000011653 RNF123Q5XPI4 1314 aa13.81□□□□□ -0.2
CD4-201ENST00000011653 XIRP1Q702N8 1843 aaKnown RBP13.81□□□□□ -0.2
CD4-201ENST00000011653 PRKAR2BP31323 418 aa13.81□□□□□ -0.2
CD4-201ENST00000011653 SULT6B1Q6IMI4 303 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms