RNA–Protein interactions for RNA: ENSMUST00000185852.6

Msh3-202, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Msh3, Length 3,946 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-202ENSMUST00000185852 Edc4Q3UJB9 1406 aaKnown RBP13.39□□□□□ -0.27
Msh3-202ENSMUST00000185852 Idi1P58044 227 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 Gsdma3Q5Y4Y6 464 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 Naip6Q9JIB6 1403 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 RalgapbQ8BQZ4 1484 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 IbtkQ6ZPR6 1352 aaKnown RBP13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 Farp2Q91VS8 1065 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 Q9D2X8 372 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 NpatQ8BMA5 1420 aa13.38□□□□□ -0.27
Msh3-202ENSMUST00000185852 Q4VA45 678 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Idi2Q8BFZ6 227 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Sytl4Q9R0Q1 673 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Ppm1fQ8CGA0 452 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Prim1P20664 417 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Dzip1Q8BMD2 852 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Map3k4O08648 1597 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Adgrl2Q8JZZ7 1487 aa13.37□□□□□ -0.27
Msh3-202ENSMUST00000185852 Dnajc10Q9DC23 793 aa13.36□□□□□ -0.27
Msh3-202ENSMUST00000185852 Stk3Q9JI10 497 aa13.36□□□□□ -0.27
Msh3-202ENSMUST00000185852 Naip7Q9JIB3 1402 aa13.36□□□□□ -0.27
Msh3-202ENSMUST00000185852 Prkrip1Q9CWV6 186 aaKnown RBP13.35□□□□□ -0.27
Msh3-202ENSMUST00000185852 Nckap5lQ6GQX2 1323 aa13.35□□□□□ -0.27
Msh3-202ENSMUST00000185852 Kiaa1551Q5DTW7 1521 aa13.35□□□□□ -0.27
Msh3-202ENSMUST00000185852 Smg7Q5RJH6 1138 aaKnown RBP13.35□□□□□ -0.27
Msh3-202ENSMUST00000185852 Q8C5K5 320 aa13.35□□□□□ -0.27
Msh3-202ENSMUST00000185852 Frmpd2A0A140LI67 1392 aa13.35□□□□□ -0.27
Msh3-202ENSMUST00000185852 Gimap6Q8K349 305 aa13.34□□□□□ -0.27
Msh3-202ENSMUST00000185852 Hsp90aa1P07901 733 aaKnown RBP13.34□□□□□ -0.27
Msh3-202ENSMUST00000185852 Nek4Q9Z1J2 792 aa13.34□□□□□ -0.27
Msh3-202ENSMUST00000185852 Cep170Q6A065 1588 aa13.34□□□□□ -0.27
Msh3-202ENSMUST00000185852 Pbrm1Q8BSQ9 1634 aaKnown RBP13.34□□□□□ -0.27
Msh3-202ENSMUST00000185852 Cwc27Q3TKY6 469 aa13.33□□□□□ -0.27
Msh3-202ENSMUST00000185852 Btbd11Q6GQW0 1109 aa13.33□□□□□ -0.27
Msh3-202ENSMUST00000185852 Dmrt2Q8BG36 561 aa13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 Fam208aQ69ZR9 1610 aaKnown RBP13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 PnnO35691 725 aaKnown RBP13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 Hmox1P14901 289 aa13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 Jarid2Q62315 1234 aa13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 Plekhm2Q80TQ5 1018 aa13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 TkfcQ8VC30 578 aa13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 Smarca5Q91ZW3 1051 aaKnown RBP13.33□□□□□ -0.28
Msh3-202ENSMUST00000185852 Eif4a2P10630 407 aa13.32□□□□□ -0.28
Msh3-202ENSMUST00000185852 Ppp1r15aP17564 657 aa13.32□□□□□ -0.28
Msh3-202ENSMUST00000185852 Gcc2Q8CHG3 1679 aa13.32□□□□□ -0.28
Msh3-202ENSMUST00000185852 Cfap74Q3UY96 1578 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Map3k19E9Q3S4 1311 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Uspl1Q3ULM6 1089 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Phactr2B1AVP0 632 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Slain2Q8CI08 581 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Hfm1D3Z4R1 1434 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Strn4P58404 760 aa13.31□□□□□ -0.28
Msh3-202ENSMUST00000185852 Nol12Q8BG17 217 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Slc35g1Q8BY79 368 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Cog6Q8R3I3 657 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 ApobrQ8VBT6 942 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Dnmt1P13864 1620 aaKnown RBP13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Q3UPC7 1272 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Tarbp1E9Q368 1579 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Rrbp1Q99PL5 1605 aaKnown RBP13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Chpf2Q3UU43 768 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Klf15Q9EPW2 415 aa13.3□□□□□ -0.28
Msh3-202ENSMUST00000185852 Gimap5Q8BWF2 308 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 Iffo2Q8R2V2 512 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 Ipo9Q91YE6 1041 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 Txnrd1Q9JMH6 613 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 TimelessQ9R1X4 1197 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 CgnP59242 1191 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 Tceal9Q9DD24 104 aa13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 CrebrfQ8CDG5 640 aaKnown RBP13.29□□□□□ -0.28
Msh3-202ENSMUST00000185852 Fam83gQ5SWY7 812 aa13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 PtmaP26350 111 aa13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 Cpsf1Q9EPU4 1441 aaKnown RBP13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 Bicdl1A0JNT9 577 aa13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 Znf326O88291 580 aa13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 Nol8Q3UHX0 1147 aaKnown RBP13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 Lrrc7Q80TE7 1490 aa13.28□□□□□ -0.28
Msh3-202ENSMUST00000185852 Ccdc183A2AJB1 534 aa13.27□□□□□ -0.28
Msh3-202ENSMUST00000185852 MccE9PWI3 1003 aa13.27□□□□□ -0.28
Msh3-202ENSMUST00000185852 Eva1cP58659 440 aa13.27□□□□□ -0.28
Msh3-202ENSMUST00000185852 Usp54Q8BL06 1588 aaKnown RBP13.27□□□□□ -0.28
Msh3-202ENSMUST00000185852 Ppp1r3fQ9JIG4 799 aa13.27□□□□□ -0.29
Msh3-202ENSMUST00000185852 TefQ9JLC6 301 aa13.27□□□□□ -0.29
Msh3-202ENSMUST00000185852 Eya1P97767 591 aa13.27□□□□□ -0.29
Msh3-202ENSMUST00000185852 Srgap3Q812A2 1099 aa13.27□□□□□ -0.29
Msh3-202ENSMUST00000185852 Pcmtd1P59913 357 aa13.26□□□□□ -0.29
Msh3-202ENSMUST00000185852 Ttc19Q8CC21 365 aa13.26□□□□□ -0.29
Msh3-202ENSMUST00000185852 Rsph6aQ8CDR2 708 aa13.26□□□□□ -0.29
Msh3-202ENSMUST00000185852 Igflr1Q3U4N7 345 aa13.26□□□□□ -0.29
Msh3-202ENSMUST00000185852 Skint5A7XUY5 1461 aa13.26□□□□□ -0.29
Msh3-202ENSMUST00000185852 FosbP13346 338 aa13.25□□□□□ -0.29
Msh3-202ENSMUST00000185852 Fmn2Q9JL04 1578 aa13.25□□□□□ -0.29
Msh3-202ENSMUST00000185852 Map4k4P97820 1233 aaKnown RBP13.25□□□□□ -0.29
Msh3-202ENSMUST00000185852 Fchsd2Q3USJ8 740 aa13.25□□□□□ -0.29
Msh3-202ENSMUST00000185852 Htatsf1Q8BGC0 757 aa13.25□□□□□ -0.29
Msh3-202ENSMUST00000185852 SkilQ60665 675 aa13.25□□□□□ -0.29
Msh3-202ENSMUST00000185852 Supt6hQ62383 1726 aaKnown RBP13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 Rbm5Q91YE7 815 aaKnown RBP13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 Kcnh5Q920E3 988 aa13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 VeztQ3ZK22 780 aa13.24□□□□□ -0.29
Msh3-202ENSMUST00000185852 Slc5a1Q8C3K6 665 aa13.24□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 14.7 ms