RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Dnajc5P60904 198 aa14.4□□□□□ -0.1
Lig1-211ENSMUST00000177588 MaddQ80U28 1577 aa14.4□□□□□ -0.1
Lig1-211ENSMUST00000177588 Tnpo1Q8BFY9 898 aaKnown RBP14.4□□□□□ -0.1
Lig1-211ENSMUST00000177588 GsdmaQ9EST1 446 aa14.4□□□□□ -0.1
Lig1-211ENSMUST00000177588 Eif2ak4Q9QZ05 1648 aa14.4□□□□□ -0.1
Lig1-211ENSMUST00000177588 Tbc1d32Q3URV1 1296 aa14.39□□□□□ -0.11
Lig1-211ENSMUST00000177588 Txndc2Q6P902 515 aa14.39□□□□□ -0.11
Lig1-211ENSMUST00000177588 Rabep1O35551 862 aa14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 Scaf11E9PZM7 1456 aaKnown RBP14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 Lrrc7Q80TE7 1490 aa14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 Ercc6l2Q9JIM3 1537 aa14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 PtprmP28828 1452 aa14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 Arhgap23Q69ZH9 1483 aa14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 Naip7Q9JIB3 1402 aa14.38□□□□□ -0.11
Lig1-211ENSMUST00000177588 Antxr1Q9CZ52 562 aa14.37□□□□□ -0.11
Lig1-211ENSMUST00000177588 Psme1P97371 249 aa14.37□□□□□ -0.11
Lig1-211ENSMUST00000177588 Polr3glQ8R0C0 218 aa14.37□□□□□ -0.11
Lig1-211ENSMUST00000177588 PalldQ9ET54 1408 aa14.36□□□□□ -0.11
Lig1-211ENSMUST00000177588 Utp14aQ640M1 767 aaKnown RBP14.36□□□□□ -0.11
Lig1-211ENSMUST00000177588 Pdcl3Q8BVF2 240 aa14.36□□□□□ -0.11
Lig1-211ENSMUST00000177588 Atl3Q91YH5 541 aa14.36□□□□□ -0.11
Lig1-211ENSMUST00000177588 Pnmal2G3X9N3 661 aa14.35□□□□□ -0.11
Lig1-211ENSMUST00000177588 Ksr2Q3UVC0 959 aa14.35□□□□□ -0.11
Lig1-211ENSMUST00000177588 AU015836B2RUM3 263 aa14.34□□□□□ -0.11
Lig1-211ENSMUST00000177588 Cald1E9QA15 768 aaKnown RBP14.34□□□□□ -0.11
Lig1-211ENSMUST00000177588 CenpjQ569L8 1344 aa14.34□□□□□ -0.11
Lig1-211ENSMUST00000177588 RictorQ6QI06 1708 aa14.34□□□□□ -0.11
Lig1-211ENSMUST00000177588 Apaf1O88879 1249 aa14.34□□□□□ -0.11
Lig1-211ENSMUST00000177588 Phlpp2Q8BXA7 1320 aa14.33□□□□□ -0.12
Lig1-211ENSMUST00000177588 Kif13aQ9EQW7 1749 aa14.33□□□□□ -0.12
Lig1-211ENSMUST00000177588 Adgrl1Q80TR1 1466 aa14.33□□□□□ -0.12
Lig1-211ENSMUST00000177588 Asxl2Q8BZ32 1370 aa14.33□□□□□ -0.12
Lig1-211ENSMUST00000177588 MyclP10166 368 aa14.32□□□□□ -0.12
Lig1-211ENSMUST00000177588 Trim26Q99PN3 545 aa14.32□□□□□ -0.12
Lig1-211ENSMUST00000177588 4933402E13RikQ9D4D2 429 aa14.32□□□□□ -0.12
Lig1-211ENSMUST00000177588 Ccar1Q8CH18 1146 aaKnown RBP14.32□□□□□ -0.12
Lig1-211ENSMUST00000177588 Ncbp3Q8BZR9 615 aaKnown RBP14.31□□□□□ -0.12
Lig1-211ENSMUST00000177588 Ppp1r3fQ9JIG4 799 aa14.31□□□□□ -0.12
Lig1-211ENSMUST00000177588 Adamtsl3G3UXC7 1706 aa14.31□□□□□ -0.12
Lig1-211ENSMUST00000177588 Exosc9Q9JHI7 438 aaKnown RBP14.31□□□□□ -0.12
Lig1-211ENSMUST00000177588 Dnttip2Q8R2M2 758 aaKnown RBP14.3□□□□□ -0.12
Lig1-211ENSMUST00000177588 Spryd3E9Q9B3 442 aa14.3□□□□□ -0.12
Lig1-211ENSMUST00000177588 InsrP15208 1372 aa14.3□□□□□ -0.12
Lig1-211ENSMUST00000177588 Itsn1Q9Z0R4 1714 aa14.3□□□□□ -0.12
Lig1-211ENSMUST00000177588 Cluap1Q8R3P7 413 aa14.29□□□□□ -0.12
Lig1-211ENSMUST00000177588 U2af1Q9D883 239 aaKnown RBP14.29□□□□□ -0.12
Lig1-211ENSMUST00000177588 Catsper2A2ARP9 588 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Kif2cQ922S8 721 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Gtf2a1Q99PM3 378 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Phf14Q9D4H9 881 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Atp2b2Q9R0K7 1198 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Mfap1aC0HKD8 439 aaKnown RBP14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Mfap1bC0HKD9 439 aaKnown RBP14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Tsen2Q6P7W5 460 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Zranb1Q7M760 708 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Hs1bp3Q3TC93 395 aa14.28□□□□□ -0.12
Lig1-211ENSMUST00000177588 Med14A2ABV5 1459 aaKnown RBP14.27□□□□□ -0.12
Lig1-211ENSMUST00000177588 AU019823E9PUQ3 292 aa14.26□□□□□ -0.13
Lig1-211ENSMUST00000177588 Terf2O35144 541 aa14.26□□□□□ -0.13
Lig1-211ENSMUST00000177588 Mcm4P49717 862 aa14.26□□□□□ -0.13
Lig1-211ENSMUST00000177588 Dusp27Q148W8 1138 aa14.26□□□□□ -0.13
Lig1-211ENSMUST00000177588 PplQ9R269 1755 aa14.26□□□□□ -0.13
Lig1-211ENSMUST00000177588 Kif20aP97329 887 aa14.25□□□□□ -0.13
Lig1-211ENSMUST00000177588 MlecQ6ZQI3 291 aaKnown RBP14.25□□□□□ -0.13
Lig1-211ENSMUST00000177588 Pknox2Q8BG99 474 aa14.25□□□□□ -0.13
Lig1-211ENSMUST00000177588 Cep170bQ80U49 1574 aa14.25□□□□□ -0.13
Lig1-211ENSMUST00000177588 Map7O88735 730 aa14.24□□□□□ -0.13
Lig1-211ENSMUST00000177588 Arhgef28P97433 1693 aa14.24□□□□□ -0.13
Lig1-211ENSMUST00000177588 Ssh1Q76I79 1042 aa14.24□□□□□ -0.13
Lig1-211ENSMUST00000177588 Gsto1O09131 240 aa14.23□□□□□ -0.13
Lig1-211ENSMUST00000177588 CastP51125 788 aa14.23□□□□□ -0.13
Lig1-211ENSMUST00000177588 Cdk19Q8BWD8 501 aa14.23□□□□□ -0.13
Lig1-211ENSMUST00000177588 Nrxn1Q9CS84 1514 aa14.23□□□□□ -0.13
Lig1-211ENSMUST00000177588 Kif18aQ91WD7 886 aa14.22□□□□□ -0.13
Lig1-211ENSMUST00000177588 IghaA0A0A6YXW6 389 aa14.22□□□□□ -0.13
Lig1-211ENSMUST00000177588 Maco1Q7TQE6 664 aaKnown RBP14.21□□□□□ -0.14
Lig1-211ENSMUST00000177588 Ttc21aQ8C0S4 1314 aa14.2□□□□□ -0.14
Lig1-211ENSMUST00000177588 Zc3h13E9Q784 1729 aaKnown RBP14.2□□□□□ -0.14
Lig1-211ENSMUST00000177588 Usp32F8VPZ3 1604 aa14.19□□□□□ -0.14
Lig1-211ENSMUST00000177588 Rbm25B2RY56 838 aaKnown RBP14.19□□□□□ -0.14
Lig1-211ENSMUST00000177588 Il4rP16382 810 aa14.19□□□□□ -0.14
Lig1-211ENSMUST00000177588 SkilQ60665 675 aa14.19□□□□□ -0.14
Lig1-211ENSMUST00000177588 Ankrd50F7BE84 1390 aa14.19□□□□□ -0.14
Lig1-211ENSMUST00000177588 HnrnpmQ9D0E1 729 aaKnown RBP14.19□□□□□ -0.14
Lig1-211ENSMUST00000177588 Ddit3P35639 168 aa14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Cog6Q8R3I3 657 aa14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Rrp9Q91WM3 475 aaKnown RBP14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Znf316Q6PGE4 1016 aa14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Ccdc60Q8C4J0 545 aa14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Ciz1Q8VEH2 845 aa14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Brd1E9PZ26 1189 aaKnown RBP14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Znf330Q922H9 316 aa14.18□□□□□ -0.14
Lig1-211ENSMUST00000177588 Plekhg1F6S200 1446 aa14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 FanciQ8K368 1330 aa14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 Cavin4A2AMM0 362 aa14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 Gm10093D3YYI8 482 aa14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 Hdac1O09106 482 aaKnown RBP14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 Nsfl1cQ9CZ44 370 aaKnown RBP14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 Uhrf1bp1B2KF50 1429 aa14.17□□□□□ -0.14
Lig1-211ENSMUST00000177588 Chd2E9PZM4 1827 aaKnown RBP14.16□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms