RNA–Protein interactions for RNA: ENSMUST00000164052.4

Vps50-202, Transcript of Syndetin, mousemouse

TSL 1 (best) BASIC

Gene Vps50, Length 4,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50-202ENSMUST00000164052 Prdm10Q3UTQ7 1184 aa6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 IqubQ8CDK3 788 aa6.76□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ccar1Q8CH18 1146 aaKnown RBP6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cetn4Q8K4K1 168 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Kif2cQ922S8 721 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Chd1lQ9CXF7 900 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Tfip11Q9ERA6 838 aaKnown RBP6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ythdc2B2RR83 1445 aaKnown RBP6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Sparcl1P70663 650 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Rbm42Q91V81 474 aaKnown RBP6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Polr3aB2RXC6 1390 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Bach2P97303 839 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Zkscan5Q9Z1D8 819 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Calcoco2A2A6M5 331 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Mctp2Q5RJH2 878 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Txndc2Q6P902 515 aa6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Nol7Q9D7Z3 254 aaKnown RBP6.75□□□□□ -1.33
Vps50-202ENSMUST00000164052 Prdm4Q80V63 803 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Psme1P97371 249 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Zmynd15Q8C0R7 736 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cpsf1Q9EPU4 1441 aaKnown RBP6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Eif4g3Q80XI3 1579 aaKnown RBP6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Samd1D3YXK1 519 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ica1lQ3TY65 431 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Kank4Q6P9J5 1016 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Adcy5P84309 1262 aa6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ctr9Q62018 1173 aaKnown RBP6.74□□□□□ -1.33
Vps50-202ENSMUST00000164052 Zcchc11B2RX14 1644 aaKnown RBP6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Lmtk2Q3TYD6 1471 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Arhgap31A6X8Z5 1425 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ksr2Q3UVC0 959 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Tmx4Q8C0L0 335 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Zfp597E9Q6S0 419 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 4930548H24RikQ9D496 437 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Utp3Q9JI13 469 aaKnown RBP6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Fam184bQ0KK56 942 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Nop14Q8R3N1 860 aaKnown RBP6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 CenpqQ9CPQ5 267 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Iqca1Q9CUL5 857 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cwc15Q9JHS9 229 aaKnown RBP6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 AatfQ9JKX4 526 aaKnown RBP6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Atp6v1dP57746 247 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Pcmtd1P59913 357 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cgnl1Q6AW69 1298 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cc2d1aQ8K1A6 943 aa6.73□□□□□ -1.33
Vps50-202ENSMUST00000164052 Plch2A2AP18 1501 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Rangap1P46061 589 aaKnown RBP6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 CastP51125 788 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Neo1P97798 1493 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Grin2bQ01097 1482 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Inpp5bQ8K337 993 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Nek4Q9Z1J2 792 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Cdk13Q69ZA1 1511 aaKnown RBP6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ess2O70279 479 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 St18Q80TY4 1045 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Otud6bQ8K2H2 294 aa6.72□□□□□ -1.33
Vps50-202ENSMUST00000164052 Kiaa1211Q5PR69 1207 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Zfp397Q7TNK4 527 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ddx41Q91VN6 622 aaKnown RBP6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 SrrtQ99MR6 875 aaKnown RBP6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Rusc2Q80U22 1514 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 KdrP35918 1367 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Ccdc146E9Q9F7 977 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Erich4Q3UNU4 136 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Prm3Q62100 101 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Morc2aQ69ZX6 1030 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Dixdc1Q80Y83 711 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Rassf4Q8CB96 322 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 MvpQ9EQK5 861 aa6.71□□□□□ -1.33
Vps50-202ENSMUST00000164052 Nup155Q99P88 1391 aaKnown RBP6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Ms4a1P19437 291 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Ccdc34Q3UI66 367 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Tbc1d8Q9Z1A9 1134 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Gm9992B2RWK3 458 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Serpinb6bO08804 377 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Nxf2Q4ZGD8 691 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Unc93aQ710D3 458 aa6.71□□□□□ -1.34
Vps50-202ENSMUST00000164052 Abcc5Q9R1X5 1436 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Il16O54824 1322 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Brd1E9PZ26 1189 aaKnown RBP6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Tpm1P58771 284 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Elp1Q7TT37 1333 aaKnown RBP6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Ttll5Q8CHB8 1328 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Tbc1d9Q3UYK3 1264 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Wwc1Q5SXA9 1104 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 CtifQ6PEE2 600 aaKnown RBP6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Fam177a1Q8BR63 207 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Rad54l2Q99NG0 1466 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Lrriq1Q0P5X1 1673 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Oas2E9Q9A9 742 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 CalrP14211 416 aaKnown RBP6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Uspl1Q3ULM6 1089 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Plin1Q8CGN5 517 aa6.7□□□□□ -1.34
Vps50-202ENSMUST00000164052 Map4P27546 1125 aaKnown RBP6.69□□□□□ -1.34
Vps50-202ENSMUST00000164052 Ssr1Q9CY50 286 aaKnown RBP6.69□□□□□ -1.34
Vps50-202ENSMUST00000164052 Hmgn5Q9JL35 406 aa6.69□□□□□ -1.34
Vps50-202ENSMUST00000164052 Lamc1P02468 1607 aaKnown RBP6.69□□□□□ -1.34
Vps50-202ENSMUST00000164052 Slc20a2Q80UP8 656 aa6.69□□□□□ -1.34
Vps50-202ENSMUST00000164052 Sf3a1Q8K4Z5 791 aaKnown RBP6.69□□□□□ -1.34
Vps50-202ENSMUST00000164052 HnrnpuQ8VEK3 800 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms