RNA–Protein interactions for RNA: ENSMUST00000161609.7

Rc3h1-202, Transcript of Roquin-1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Rc3h1, Length 11,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1-202ENSMUST00000161609 Sh3bgrQ9WUZ7 214 aa9.48□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Trim30cD3YVI9 513 aa9.48□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ankrd13dQ6PD24 605 aa9.48□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Trim30aP15533 496 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ccdc85aQ5SP85 500 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Lman1Q9D0F3 517 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Htatsf1Q8BGC0 757 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Zbtb3Q91X45 518 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Sstr3P30935 428 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Irx3P81067 507 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Dusp27Q148W8 1138 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ankib1Q6ZPS6 1085 aa9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Chmp4bQ9D8B3 224 aaKnown RBP9.47□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Erc1Q99MI1 1120 aa9.46□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Gm44503E9PYU5 387 aa9.46□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Otud6bQ8K2H2 294 aa9.46□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Tbc1d7Q9D0K0 293 aa9.46□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Cplx2P84086 134 aa9.46□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Nap1l3Q794H2 544 aa9.46□□□□□ -0.89
Rc3h1-202ENSMUST00000161609 Ripk4Q9ERK0 786 aa9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 NsmfQ99NF2 532 aa9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Rufy1Q8BIJ7 712 aa9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ctnnbl1Q9CWL8 563 aaKnown RBP9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Larp6Q8BN59 492 aa9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Supt16hQ920B9 1047 aa9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 CenphQ9QYM8 241 aa9.46□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ppp2r5cQ60996 524 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Tsta3P23591 321 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Rapgef4Q9EQZ6 1011 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ccdc155Q80VJ8 648 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 PogkQ80TC5 607 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Klc3Q91W40 508 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Cacna2d4Q5RJF7 1116 aa9.45□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 RdxP26043 583 aaKnown RBP9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Syndig1A2ANU3 258 aa9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Sept11Q8C1B7 431 aaKnown RBP9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Sh3d21Q7TSG5 549 aa9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Prkag2Q91WG5 566 aa9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ehmt1Q5DW34 1296 aa9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Cep164Q5DU05 1446 aa9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 TefQ9JLC6 301 aa9.44□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Fchsd2Q3USJ8 740 aa9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Dixdc1Q80Y83 711 aa9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Trim34aQ99PP6 485 aa9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Usp40Q8BWR4 1235 aa9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Smc1aQ9CU62 1233 aaKnown RBP9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 RbsnQ80Y56 783 aa9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Exoc6Q8R313 802 aa9.43□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ano3A2AHL1 981 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Lmod1Q8BVA4 595 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Rrs1Q9CYH6 365 aaKnown RBP9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Wdr70Q3TWF6 657 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Crybg3Q80W49 1005 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Frmd3Q8BHD4 595 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Cfap52Q5F201 620 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ggnbp2Q5SV77 696 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 NaspQ99MD9 773 aaKnown RBP9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Jdp2P97875 163 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Bnip3lQ9Z2F7 218 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Exoc6bA6H5Z3 810 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Zrsr2Q62377 462 aaKnown RBP9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 B4galnt4Q766D5 1034 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Tmco4Q91WU4 631 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Tmf1B9EKI3 1091 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Nkx1-1G3UXB3 402 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Pde1cQ64338 706 aa9.42□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Cabp1Q9JLK7 227 aa9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Nfxl1E9Q8I7 918 aaKnown RBP9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Znf131Q8K3J5 619 aa9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Afap1Q80YS6 731 aa9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Slc7a3P70423 618 aa9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Pet2A2AHY8 747 aa9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Rnf214Q8BFU3 668 aaKnown RBP9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ptcd1Q8C2E4 695 aaKnown RBP9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Trim29Q8R2Q0 587 aa9.41□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ric3Q8BPM6 367 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Spout1Q3UHX9 385 aaKnown RBP9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Vps41Q5KU39 853 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Bzw2Q91VK1 419 aaKnown RBP9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 ThrspQ62264 150 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Neurog2P70447 263 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Sparcl1P70663 650 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Ccer2J3QPU5 274 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Suds3Q8BR65 328 aa9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Noc2lQ9WV70 747 aaKnown RBP9.4□□□□□ -0.9
Rc3h1-202ENSMUST00000161609 Spty2d1Q68FG3 682 aa9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 4933402E13RikQ9D4D2 429 aa9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Ipo7Q9EPL8 1038 aaKnown RBP9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Ttc30a2A2AKQ8 664 aa9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Ttc30a1Q99J38 664 aa9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Pard3bQ9CSB4 1203 aa9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Ttc30bQ9CY00 664 aa9.4□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Pkd2O35245 966 aa9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Chmp5Q9D7S9 219 aa9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Iqsec3Q3TES0 1195 aa9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Fermt2Q8CIB5 680 aa9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Hdac9Q99N13 588 aa9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Epb41l3Q9WV92 929 aa9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Ddx23D3Z0M9 819 aaKnown RBP9.39□□□□□ -0.91
Rc3h1-202ENSMUST00000161609 Rmi1Q9D4G9 616 aa9.39□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 77.3 ms