RNA–Protein interactions for RNA: ENSMUST00000119896.1

Ssr3-202, Transcript of Translocon-associated protein subunit gamma, mousemouse

TSL 1 (best) BASIC

Gene Ssr3, Length 1,469 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-202ENSMUST00000119896 Nrxn1Q9CS84 1514 aa13.4□□□□□ -0.26
Ssr3-202ENSMUST00000119896 Ccdc129Q14B48 1034 aa13.39□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Usp40Q8BWR4 1235 aa13.39□□□□□ -0.27
Ssr3-202ENSMUST00000119896 ZgpatQ8VDM1 511 aa13.39□□□□□ -0.27
Ssr3-202ENSMUST00000119896 PaskQ8CEE6 1383 aa13.39□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Ubap1lG3UW59 384 aa13.38□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Adamtsl1Q8BLI0 1745 aa13.38□□□□□ -0.27
Ssr3-202ENSMUST00000119896 ArsiQ32KI9 573 aa13.37□□□□□ -0.27
Ssr3-202ENSMUST00000119896 RalgapbQ8BQZ4 1484 aa13.37□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Cdk19Q8BWD8 501 aa13.36□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Cpsf1Q9EPU4 1441 aaKnown RBP13.36□□□□□ -0.27
Ssr3-202ENSMUST00000119896 HdgfP51859 237 aaKnown RBP13.36□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Dzip1Q8BMD2 852 aa13.36□□□□□ -0.27
Ssr3-202ENSMUST00000119896 TimelessQ9R1X4 1197 aa13.35□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Bcl9lQ67FY2 1494 aa13.35□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Ncapd2Q8K2Z4 1392 aa13.34□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Nup153E9Q3G8 1462 aaKnown RBP13.34□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Sipa1l1Q8C0T5 1782 aa13.34□□□□□ -0.27
Ssr3-202ENSMUST00000119896 Mon2Q80TL7 1715 aa13.33□□□□□ -0.27
Ssr3-202ENSMUST00000119896 NktrP30415 1453 aa13.33□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Sbno1Q689Z5 1390 aa13.32□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Gm16486A0A1D5RMD1 1434 aa13.32□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Pard3Q99NH2 1333 aa13.32□□□□□ -0.28
Ssr3-202ENSMUST00000119896 VirmaA2AIV2 1811 aaKnown RBP13.32□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Card11Q8CIS0 1159 aa13.31□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Nid2O88322 1403 aa13.31□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Taok3Q8BYC6 898 aa13.3□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Cacna1sQ02789 1880 aa13.3□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Ehmt2Q9Z148 1263 aaKnown RBP13.29□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Ly75Q60767 1723 aa13.29□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Nphp4P59240 1425 aa13.29□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Znf219Q6IQX8 726 aa13.29□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Tet3Q8BG87 1668 aa13.28□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Gm21698A0A087WQP8 267 aa13.28□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Gm21671G3UY31 267 aa13.28□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Eid3Q3V124 375 aa13.28□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Ppp6r1Q7TSI3 856 aa13.28□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Pm20d1Q8C165 503 aa13.28□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Tnrc6bQ8BKI2 1810 aaKnown RBP13.27□□□□□ -0.28
Ssr3-202ENSMUST00000119896 Gtf2e1Q9D0D5 440 aa13.27□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Mug2P28666 1451 aa13.26□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Idi2Q8BFZ6 227 aa13.26□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Frmpd2A0A140LI67 1392 aa13.26□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Gsto1O09131 240 aa13.25□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Slx1bQ8BX32 270 aa13.25□□□□□ -0.29
Ssr3-202ENSMUST00000119896 CenpjQ569L8 1344 aa13.25□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Hspa5P20029 655 aaKnown RBP13.24□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Apba2P98084 750 aa13.24□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Gimap6Q8K349 305 aa13.24□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Zeb2Q9R0G7 1215 aa13.24□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Fer1l6E0CZ42 1862 aa13.24□□□□□ -0.29
Ssr3-202ENSMUST00000119896 4930523C07RikE9Q2T4 99 aa13.23□□□□□ -0.29
Ssr3-202ENSMUST00000119896 CatipB9EKE5 520 aa13.23□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Map3k19E9Q3S4 1311 aa13.23□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Neurod1Q60867 357 aa13.23□□□□□ -0.29
Ssr3-202ENSMUST00000119896 TonslQ6NZL6 1363 aa13.21□□□□□ -0.29
Ssr3-202ENSMUST00000119896 Ncoa4Q5U4H9 625 aa13.21□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Zbtb4Q5F293 982 aa13.2□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Ezh2Q61188 746 aaKnown RBP13.2□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Stard8Q8K031 1019 aa13.2□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Mast2Q60592 1734 aa13.19□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Card10P58660 1021 aa13.19□□□□□ -0.3
Ssr3-202ENSMUST00000119896 FanciQ8K368 1330 aa13.18□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Srcin1Q9QWI6 1250 aa13.18□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Exosc9Q9JHI7 438 aaKnown RBP13.17□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Znf335A2A5K6 1337 aa13.17□□□□□ -0.3
Ssr3-202ENSMUST00000119896 GakQ99KY4 1305 aa13.17□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Amotl2Q8K371 772 aa13.16□□□□□ -0.3
Ssr3-202ENSMUST00000119896 PsdQ5DTT2 1024 aa13.16□□□□□ -0.3
Ssr3-202ENSMUST00000119896 GalcP54818 684 aa13.15□□□□□ -0.3
Ssr3-202ENSMUST00000119896 Astn2Q80Z10 1352 aa13.15□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Rab3gap2Q8BMG7 1366 aa13.15□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Gm21190A0A0G2JGJ6 266 aa13.14□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Lrit1Q8K099 624 aa13.14□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Zcrb1Q9CZ96 217 aaKnown RBP13.14□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Dnajc10Q9DC23 793 aa13.14□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Vps33bP59016 617 aa13.13□□□□□ -0.31
Ssr3-202ENSMUST00000119896 TnrQ8BYI9 1358 aa13.13□□□□□ -0.31
Ssr3-202ENSMUST00000119896 En2P09066 324 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Vars2Q3U2A8 1060 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 RgmbQ7TQ33 436 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Ankrd23Q812A3 306 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Kcnh5Q920E3 988 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Kif16bB1AVY7 1312 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Nckap5lQ6GQX2 1323 aa13.12□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Kcna3P16390 528 aa13.11□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Dennd6aQ8BH65 605 aa13.11□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Nlgn1Q99K10 843 aa13.11□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Slc34a2Q9DBP0 697 aa13.11□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Magea1O89006 320 aa13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Magea5O89009 320 aa13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Magea2Q9R2A2 320 aa13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Snapc4Q8BP86 1333 aa13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Ppfibp2O35711 882 aa13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Ddb1Q3U1J4 1140 aaKnown RBP13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Gpr150Q8BL07 427 aa13.1□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Erbb3Q61526 1339 aa13.09□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Nwd2Q6P5U7 1742 aa13.09□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Uhrf1bp1lA2RSJ4 1457 aa13.09□□□□□ -0.31
Ssr3-202ENSMUST00000119896 Mier1Q5UAK0 511 aa13.09□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms