RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Gabpb2P81069 414 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Ankib1Q6ZPS6 1085 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Magi1Q6RHR9 1471 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Rec8Q8C5S7 591 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Dnai1Q8C0M8 701 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Nutm1Q8BHP2 1126 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Sel1lQ9Z2G6 790 aa13.74□□□□□ -0.21
Chd3-202ENSMUST00000108661 Cfap69Q8BH53 942 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 KinQ8K339 391 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Stk3Q9JI10 497 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Pde3aQ9Z0X4 1141 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Mroh2bQ7M6Y6 1581 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Nsfl1cQ9CZ44 370 aaKnown RBP13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Slc52a2Q9D8F3 450 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Gtf2f1Q3THK3 508 aaKnown RBP13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Camsap1A2AHC3 1581 aa13.73□□□□□ -0.21
Chd3-202ENSMUST00000108661 Odf2lQ9D478 642 aa13.72□□□□□ -0.21
Chd3-202ENSMUST00000108661 Atp10dQ8K2X1 1416 aa13.72□□□□□ -0.21
Chd3-202ENSMUST00000108661 Drc7Q6V3W6 876 aa13.72□□□□□ -0.21
Chd3-202ENSMUST00000108661 Eif3aP23116 1344 aaKnown RBP13.72□□□□□ -0.21
Chd3-202ENSMUST00000108661 Cdca7Q9D0M2 382 aa13.72□□□□□ -0.21
Chd3-202ENSMUST00000108661 Hap1O35668 628 aa13.71□□□□□ -0.21
Chd3-202ENSMUST00000108661 TbcaP48428 108 aaKnown RBP13.71□□□□□ -0.21
Chd3-202ENSMUST00000108661 Cavin4A2AMM0 362 aa13.71□□□□□ -0.22
Chd3-202ENSMUST00000108661 Lamc3Q9R0B6 1581 aa13.71□□□□□ -0.22
Chd3-202ENSMUST00000108661 Grin2aP35436 1464 aa13.7□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ttc21bQ0HA38 1315 aa13.7□□□□□ -0.22
Chd3-202ENSMUST00000108661 Sf3a1Q8K4Z5 791 aaKnown RBP13.7□□□□□ -0.22
Chd3-202ENSMUST00000108661 SynmQ70IV5 1561 aa13.7□□□□□ -0.22
Chd3-202ENSMUST00000108661 Hook1Q8BIL5 728 aa13.7□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ggnbp2Q5SV77 696 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Trim30aP15533 496 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 VgfQ0VGU4 617 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Znf710Q3U288 666 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Nol8Q3UHX0 1147 aaKnown RBP13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Fkbp5Q64378 456 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Jdp2P97875 163 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Vps8Q0P5W1 1427 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Smarcc1P97496 1104 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 RdxP26043 583 aaKnown RBP13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 SnrkQ8VDU5 748 aa13.69□□□□□ -0.22
Chd3-202ENSMUST00000108661 Gtpbp6Q3U6U5 514 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Trim58Q5NCC9 485 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ipo4Q8VI75 1082 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ankrd36D3Z4K0 1415 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Phactr2B1AVP0 632 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Kif16bB1AVY7 1312 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Arhgef5E9Q7D5 1581 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Myom3A2ABU4 1439 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Dixdc1Q80Y83 711 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ccdc178Q8CDV0 866 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 Cyp46a1Q9WVK8 500 aa13.68□□□□□ -0.22
Chd3-202ENSMUST00000108661 ChgaP26339 463 aaKnown RBP13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ccdc30Q8BVF4 654 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 IbtkQ6ZPR6 1352 aaKnown RBP13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Exoc6bA6H5Z3 810 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 VeztQ3ZK22 780 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Il16O54824 1322 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ipo7Q9EPL8 1038 aaKnown RBP13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Pde4dQ01063 747 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 TimelessQ9R1X4 1197 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Q9D2X8 372 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Sh3bgrQ9WUZ7 214 aa13.67□□□□□ -0.22
Chd3-202ENSMUST00000108661 Kif21aQ9QXL2 1672 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Ccdc171E9Q1U1 1324 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Washc2Q6PGL7 1334 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Gnai2P08752 355 aaKnown RBP13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Gsdma2Q32M21 443 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Polr3gQ6NXY9 223 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Rrp12Q6P5B0 1295 aaKnown RBP13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 St5Q924W7 1134 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Armc3A2AU72 881 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Rbm26Q6NZN0 1012 aaKnown RBP13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Znf428Q8C1M2 176 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Plcd4Q8K3R3 807 aa13.66□□□□□ -0.22
Chd3-202ENSMUST00000108661 Zcwpw1Q6IR42 630 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 Gprasp1Q5U4C1 1347 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 Tmem94Q7TSH8 1360 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 Map3k13Q1HKZ5 959 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 Psma5Q9Z2U1 241 aaKnown RBP13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 A0A0U1RNP2 1173 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 TrhQ62361 256 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 PalmQ9Z0P4 383 aa13.65□□□□□ -0.22
Chd3-202ENSMUST00000108661 Tmod2Q9JKK7 351 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Map3k1P53349 1493 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 SfswapQ3USH5 945 aaKnown RBP13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Vps37dQ810I0 261 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Apaf1O88879 1249 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Rpgrip1lQ8CG73 1264 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Smc3Q9CW03 1217 aaKnown RBP13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ifit1bl2Q3U687 466 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Znf18Q810A1 556 aa13.64□□□□□ -0.23
Chd3-202ENSMUST00000108661 Naip1Q9QWK5 1403 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Bicd2Q921C5 820 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Slf2Q6P9P0 1278 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Caskin1Q6P9K8 1431 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Dzip1Q8BMD2 852 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 NexmifQ5DTT1 1515 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Mapkbp1Q6NS57 1503 aa13.63□□□□□ -0.23
Chd3-202ENSMUST00000108661 Ythdc2B2RR83 1445 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 42.2 ms