RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 SrrtQ99MR6 875 aaKnown RBP27.51■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Spag5Q7TME2 1165 aa27.5■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Prdm16A2A935 1275 aa27.5■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Luc7lQ9CYI4 371 aaKnown RBP27.49■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Tdrd9Q14BI7 1383 aa27.49■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 TxlnbQ8VBT1 685 aa27.48■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Ccdc83Q9D4V3 305 aa27.48■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Jakmip2D3YXK0 820 aa27.48■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Sycp1Q62209 993 aa27.48■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Atad2bE9Q166 1460 aaKnown RBP27.48■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Gm21190A0A0G2JGJ6 266 aa27.47■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Stk3Q9JI10 497 aa27.47■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Top2aQ01320 1528 aaKnown RBP27.46■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Gtf2f1Q3THK3 508 aaKnown RBP27.46■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Cog6Q8R3I3 657 aa27.46■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Eif3aP23116 1344 aaKnown RBP27.46■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Nup88Q8CEC0 753 aaKnown RBP27.45■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 CenpqQ9CPQ5 267 aa27.45■■□□□ 1.99
Sh3rf1-201ENSMUST00000034060 Puf60Q3UEB3 564 aaKnown RBP27.45■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Cfap58B2RW38 873 aa27.44■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Pdcl2Q78Y63 240 aa27.44■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 ImpactO55091 318 aa27.44■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Map9Q3TRR0 646 aa27.44■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Rhot2Q8JZN7 620 aa27.43■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Pdia4P08003 638 aaKnown RBP27.43■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Cep57l1Q8VDS7 400 aa27.43■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Ppp6r1Q7TSI3 856 aa27.42■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Ercc6lQ8BHK9 1240 aa27.42■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Cnnm3Q32NY4 713 aa27.42■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Shroom4Q1W617 1475 aa27.42■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Rsph6aQ8CDR2 708 aa27.42■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Ccdc96Q9CR92 584 aa27.42■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Mphosph10Q810V0 681 aaKnown RBP27.41■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Hs1bp3Q3TC93 395 aa27.41■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Ppp4r3bQ922R5 820 aa27.41■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Ttll5Q8CHB8 1328 aa27.41■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Mctp1E9PV86 951 aa27.4■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Gnl3lQ6PGG6 577 aaKnown RBP27.4■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 MicalclQ9D5U9 680 aa27.4■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 Naip1Q9QWK5 1403 aa27.4■■□□□ 1.98
Sh3rf1-201ENSMUST00000034060 ItpripQ3TNL8 555 aa27.38■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Tango6Q8C3S2 1079 aa27.38■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Slu7Q8BHJ9 585 aa27.38■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Stim1P70302 685 aa27.38■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Ift57Q8BXG3 429 aa27.38■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 NinlQ6ZQ12 1394 aa27.36■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Rbm28Q8CGC6 750 aaKnown RBP27.36■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Cdc45Q9Z1X9 566 aa27.36■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Arglu1Q3UL36 271 aaKnown RBP27.35■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Wdr33Q8K4P0 1330 aaKnown RBP27.35■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Cd109Q8R422 1442 aa27.35■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Stk11ipQ3TAA7 1072 aa27.34■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Cfap45Q9D9U9 551 aa27.34■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Pde4cQ3UEI1 686 aa27.34■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Fchsd2Q3USJ8 740 aa27.34■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Wwc1Q5SXA9 1104 aa27.34■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 ScribQ80U72 1612 aa27.33■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 CarsQ9ER72 831 aaKnown RBP27.33■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Jakmip1Q8BVL9 626 aa27.33■■□□□ 1.97
Sh3rf1-201ENSMUST00000034060 Arhgef5E9Q7D5 1581 aa27.33■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Mcm4P49717 862 aa27.32■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 HypkQ9CR41 129 aa27.32■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 MvpQ9EQK5 861 aa27.32■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Hvcn1Q3U2S8 269 aa27.32■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Gbp4Q61107 620 aa27.32■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Prpf4bQ61136 1007 aaKnown RBP27.31■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Abcd1P48410 736 aa27.31■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Syce3B5KM66 88 aa27.31■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Fyb1O35601 819 aa27.3■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Cdkl5Q3UTQ8 938 aa27.3■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Gse1Q3U3C9 1213 aa27.3■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Babam1Q3UI43 333 aa27.3■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Ppip5k2Q6ZQB6 1129 aa27.3■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 CenphQ9QYM8 241 aa27.3■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 DmtnQ9WV69 405 aa27.29■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 ScaperF8VQ70 1398 aaKnown RBP27.29■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Lamb3Q61087 1168 aa27.29■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 PsapQ61207 557 aaKnown RBP27.28■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Lrrc45Q8CIM1 670 aa27.28■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Ubap1lG3UW59 384 aa27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Erc1Q99MI1 1120 aa27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Agtpbp1Q641K1 1218 aa27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Jph4Q80WT0 628 aa27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Ccdc181Q80ZU5 509 aa27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 LarsQ8BMJ2 1178 aa27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Smc5Q8CG46 1101 aaKnown RBP27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Ccar2Q8VDP4 922 aaKnown RBP27.27■■□□□ 1.96
Sh3rf1-201ENSMUST00000034060 Samm50Q8BGH2 469 aa27.26■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Commd10Q8JZY2 202 aa27.26■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Top1mtQ8R4U6 593 aa27.26■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Atp2b2Q9R0K7 1198 aa27.25■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Rcan3Q9JKK0 239 aa27.25■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Map3k1P53349 1493 aa27.25■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Adck5Q80V03 582 aa27.24■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Apaf1O88879 1249 aa27.24■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Dusp27Q148W8 1138 aa27.24■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Lmbr1Q9JIT0 490 aa27.24■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Trim30cD3YVI9 513 aa27.23■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 Prl7d1P04769 244 aa27.23■■□□□ 1.95
Sh3rf1-201ENSMUST00000034060 TefQ9JLC6 301 aa27.23■■□□□ 1.95
Retrieved 100 of 22,080 RNA–protein pairs in 32.9 ms