RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 HACD1B0YJ81 288 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 CREB3O43889 395 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 GRK2P25098 689 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PEX2P28328 305 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 MARCH8Q5T0T0 291 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 AP1ARQ63HQ0 302 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 ADGRG6Q86SQ4 1221 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 SLC16A10Q8TF71 515 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PPP2R3CQ969Q6 453 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 CERS2Q96G23 380 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 TRAPPC9Q96Q05 1148 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 C16orf70Q9BSU1 422 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 ADM5C9JUS6 153 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 E9PBE3 544 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 KLHL41O60662 606 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 OPHN1O60890 802 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 TKTP29401 623 aaKnown RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 GP5P40197 560 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 RPL34P49207 117 aaKnown RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PGGT1BP53609 377 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 IRF9Q00978 393 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 ROR2Q01974 943 aaKnown RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 HNRNPDQ14103 355 aaKnown RBP14.17□□□□□ -0.14
PHGDH-233ENST00000642021 INSCQ1MX18 579 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 HACE1Q8IYU2 909 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 NME8Q8N427 588 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 RNF139Q8WU17 664 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 FAM149B1Q96BN6 582 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 GORASP1Q9BQQ3 440 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 CDHR5Q9HBB8 845 aa14.17□□□□□ -0.14
PHGDH-233ENST00000642021 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-233ENST00000642021 MATKP42679 507 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 SULT1E1P49888 294 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 BCAT1P54687 386 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 AQP4P55087 323 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 CUL3Q13618 768 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 DCAF6Q58WW2 860 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 C9orf57Q5W0N0 161 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 FSTL4Q6MZW2 842 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 TAPT1Q6NXT6 567 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 ARMCX2Q7L311 632 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 STRADAQ7RTN6 431 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 PID1Q7Z2X4 250 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 UNC93AQ86WB7 457 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 GBP5Q96PP8 586 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 EIF2B3Q9NR50 452 aaKnown RBP14.16□□□□□ -0.14
PHGDH-233ENST00000642021 G3V2L1 256 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 POLBP06746 335 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 AKAP5P24588 427 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 GNL1P36915 607 aaPredicted RBP14.16□□□□□ -0.14
PHGDH-233ENST00000642021 GLUD2P49448 558 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 NDUFV1P49821 464 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 SNX16P57768 344 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 DLG1Q12959 904 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 CMTM5Q96DZ9 223 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 SNX27Q96L92 541 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 OR52B2Q96RD2 323 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 TXNDC16Q9P2K2 825 aa14.16□□□□□ -0.14
PHGDH-233ENST00000642021 CITO14578 2027 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 FAM72CH0Y354 149 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 BEST1O76090 585 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 LTFP02788 710 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 AMHP03971 560 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 TBL3Q12788 808 aaKnown RBP14.15□□□□□ -0.14
PHGDH-233ENST00000642021 ITGA7Q13683 1181 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 SLC25A52Q3SY17 297 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 FAM72AQ5TYM5 149 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 SYPL2Q5VXT5 272 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 FAM72DQ6L9T8 149 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 EPGNQ6UW88 154 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 STRA8Q7Z7C7 330 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 FAM72BQ86X60 149 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 CRYBG2Q8N1P7 616 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 RNF169Q8NCN4 708 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 GDPD5Q8WTR4 605 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 MFSD3Q96ES6 412 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 ZDHHC7Q9NXF8 308 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 PCDHB12Q9Y5F1 795 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 H3BNX3 289 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 COX4I1P13073 169 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 MAGEA12P43365 314 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 CCR10P46092 362 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 RABGGTBP53611 331 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 LAMC2Q13753 1193 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 CFAP157Q5JU67 520 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 PIGZQ86VD9 579 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 FBXW8Q8N3Y1 598 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 ZNF669Q96BR6 464 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-233ENST00000642021 LENG8Q96PV6 779 aaPredicted RBP14.15□□□□□ -0.14
PHGDH-233ENST00000642021 RBBP8Q99708 897 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 CPNE1Q99829 537 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 NXF3Q9H4D5 531 aaKnown RBP14.15□□□□□ -0.14
PHGDH-233ENST00000642021 GOLGA2P5Q9HBQ8 144 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 ANLNQ9NQW6 1124 aa14.15□□□□□ -0.14
PHGDH-233ENST00000642021 CPSF2Q9P2I0 782 aaKnown RBP14.15□□□□□ -0.14
PHGDH-233ENST00000642021 ZCWPW2A0A1B0GU75 182 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-233ENST00000642021 H3BRB1 525 aa14.14□□□□□ -0.15
PHGDH-233ENST00000642021 I6L893 689 aaPredicted RBP14.14□□□□□ -0.15
PHGDH-233ENST00000642021 MYL4P12829 197 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms