RNA–Protein interactions for RNA: ENST00000641711.1

PHGDH-224, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 712 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-224ENST00000641711 GPRIN1Q7Z2K8 1008 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 CCDC25Q86WR0 208 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 MAP7D3Q8IWC1 876 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 CMTM8Q8IZV2 173 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 SCAMP5Q8TAC9 235 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 ELSPBP1Q96BH3 223 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 FAF2Q96CS3 445 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 TCEAL4Q96EI5 215 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 PIWIL1Q96J94 861 aaKnown RBP10.59□□□□□ -0.71
PHGDH-224ENST00000641711 TTC25Q96NG3 672 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 ASB16Q96NS5 453 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 ULBP1Q9BZM6 244 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 EPN3Q9H201 632 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 LRRC4CQ9HCJ2 640 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 NINJ2Q9NZG7 142 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 BCCIPQ9P287 314 aaKnown RBP eCLIP10.59□□□□□ -0.71
PHGDH-224ENST00000641711 PCSK1NQ9UHG2 260 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 CDH22Q9UJ99 828 aa10.59□□□□□ -0.71
PHGDH-224ENST00000641711 FARP1Q9Y4F1 1045 aaPredicted RBP10.59□□□□□ -0.71
PHGDH-224ENST00000641711 SPTBN5Q9NRC6 3674 aaKnown RBP10.59□□□□□ -0.71
PHGDH-224ENST00000641711 F5P12259 2224 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ALOX15BO15296 676 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 TLR5O60602 858 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 CD48P09326 243 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 TGM2P21980 687 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 IL4RP24394 825 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 STIP1P31948 543 aaKnown RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 HPDP32754 393 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 MMP13P45452 471 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 VPS41P49754 854 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 CYP4F8P98187 520 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 GUCY1A3Q02108 690 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 GPS1Q13098 491 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 USP4Q13107 963 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 HTR4Q13639 388 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 DPYSL3Q14195 570 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 STAT4Q14765 748 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 NOMO1Q15155 1222 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 TAF5Q15542 800 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 C15orf59Q2T9L4 293 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 UBAP2Q5T6F2 1119 aaKnown RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 SH3PXD2AQ5TCZ1 1133 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 MSANTD2Q6P1R3 559 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 RFX6Q8HWS3 928 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 SCUBE3Q8IX30 993 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 CELF5Q8N6W0 485 aaKnown RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 GLIS1Q8NBF1 620 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ZSCAN18Q8TBC5 510 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ADAMTS19Q8TE59 1207 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ING5Q8WYH8 240 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 HSPH1Q92598 858 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 PRCCQ92733 491 aaPredicted RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 RNF157Q96PX1 679 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ZNF670Q9BS34 389 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 DDX23Q9BUQ8 820 aaKnown RBP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 PRDM16Q9HAZ2 1276 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ZFP14Q9HCL3 533 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ABCC13Q9NSE7 274 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.58□□□□□ -0.72
PHGDH-224ENST00000641711 GMIPQ9P107 970 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 LGALS13Q9UHV8 139 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 ARHGAP26Q9UNA1 814 aa10.58□□□□□ -0.72
PHGDH-224ENST00000641711 SGK1O00141 431 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 MCF2LO15068 1137 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 ACSL3O95573 720 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 LTFP02788 710 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 CKMP06732 381 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 ZSCAN5DPP0CG00 497 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 ETS1P14921 441 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 ATP5DP30049 168 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 RDXP35241 583 aaKnown RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 MAGEA4P43358 317 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 CDH6P55285 790 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 HDAC4P56524 1084 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 EIF3EP60228 445 aaKnown RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 YWHAGP61981 247 aaKnown RBP eCLIP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 IFRD2Q12894 506 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 RASA2Q15283 850 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 KYNUQ16719 465 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 EFHC1Q5JVL4 640 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 SLC9A4Q6AI14 798 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 STRADAQ7RTN6 431 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 BHLHA9Q7RTU4 235 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 PRUNE1Q86TP1 453 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 PSTKQ8IV42 348 aaKnown RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 GJD3Q8N144 294 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 RIBC1Q8N443 379 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 BCAS4Q8TDM0 211 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 EPS8L3Q8TE67 593 aaKnown RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 FAM172AQ8WUF8 416 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 HAUS1Q96CS2 278 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 RTP4Q96DX8 246 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 CFAP57Q96MR6 1250 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 RBM15Q96T37 977 aaKnown RBP eCLIP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 UHRF1Q96T88 793 aaPredicted RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 CCDC77Q9BR77 488 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 TMEM121Q9BTD3 319 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 MAK16Q9BXY0 300 aaKnown RBP10.57□□□□□ -0.72
PHGDH-224ENST00000641711 PPCSQ9HAB8 311 aa10.57□□□□□ -0.72
PHGDH-224ENST00000641711 PCDH18Q9HCL0 1135 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms