RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 PHTF2Q8N3S3 785 aa17.25■□□□□ 0.35
PHGDH-223ENST00000641597 DCLK2Q8N568 766 aa17.25■□□□□ 0.35
PHGDH-223ENST00000641597 CFAP61Q8NHU2 1237 aa17.25■□□□□ 0.35
PHGDH-223ENST00000641597 CCDC124Q96CT7 223 aaKnown RBP17.25■□□□□ 0.35
PHGDH-223ENST00000641597 CELF6Q96J87 481 aaKnown RBP17.25■□□□□ 0.35
PHGDH-223ENST00000641597 PAAF1Q9BRP4 392 aa17.25■□□□□ 0.35
PHGDH-223ENST00000641597 LRRC4Q9HBW1 653 aa17.25■□□□□ 0.35
PHGDH-223ENST00000641597 SNX15Q9NRS6 342 aa17.25■□□□□ 0.35
PHGDH-223ENST00000641597 MYBPHLA2RUH7 354 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 SPECC1L-ADORA2AF8WAN1 911 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 NPR3P17342 541 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 PTPN1P18031 435 aaKnown RBP17.24■□□□□ 0.35
PHGDH-223ENST00000641597 PTPN3P26045 913 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 CPOXP36551 454 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 CCNA1P78396 465 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 IFRD2Q12894 506 aaPredicted RBP17.24■□□□□ 0.35
PHGDH-223ENST00000641597 ZBTB17Q13105 803 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 ITGA7Q13683 1181 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 LRRC36Q1X8D7 754 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 EML3Q32P44 896 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 TRIM42Q8IWZ5 723 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 PHC3Q8NDX5 983 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 HIPK4Q8NE63 616 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 ATP2A3Q93084 1043 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 CERS2Q96G23 380 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 YIPF3Q9GZM5 350 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 BATF3Q9NR55 127 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 CHRAC1Q9NRG0 131 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 GDAP2Q9NXN4 497 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 ZNF487B1APH4 448 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 BIRC5O15392 142 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 BAG2O95816 211 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 GSTA2P09210 222 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 YBX3P16989 372 aaKnown RBP eCLIP17.24■□□□□ 0.352e-7■□□□□ 9.8
PHGDH-223ENST00000641597 FDFT1P37268 417 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 EPHB1P54762 984 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 SARNPP82979 210 aaKnown RBP17.24■□□□□ 0.35
PHGDH-223ENST00000641597 PAN2Q504Q3 1202 aaKnown RBP17.24■□□□□ 0.35
PHGDH-223ENST00000641597 RABGAP1LQ5R372 815 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 LDLRAD1Q5T700 205 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 FAM219BQ5XKK7 198 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 OLFML2BQ68BL8 750 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 KYAT3Q6YP21 454 aaKnown RBP17.24■□□□□ 0.35
PHGDH-223ENST00000641597 STRA8Q7Z7C7 330 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 SIX6OS1Q8N1H7 587 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 DNAAF3Q8N9W5 541 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 LPPQ93052 612 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 HSFY1Q96LI6 401 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 TUBB6Q9BUF5 446 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 FLRT1Q9NZU1 646 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 RALGAPA2Q2PPJ7 1873 aa17.24■□□□□ 0.35
PHGDH-223ENST00000641597 DCLK1O15075 740 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 OPHN1O60890 802 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 SIN3BO75182 1162 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 LTFP02788 710 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 SERPINA6P08185 405 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 CD68P34810 354 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 IDH3AP50213 366 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 SNX16P57768 344 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 C1orf146Q5VVC0 180 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 FSTL4Q6MZW2 842 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 USP33Q8TEY7 942 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 SH3TC2Q8TF17 1288 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 FAM136AQ96C01 138 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 DDX50Q9BQ39 737 aaKnown RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 MLPHQ9BV36 600 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 COPG2Q9UBF2 871 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 TTC3P53804 2025 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 A0A088AWK7 358 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 A6NHS1 94 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 TM7SF2O76062 418 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 CCNHP51946 323 aaPredicted RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 TWF2Q6IBS0 349 aaKnown RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 ZNF781Q8N8C0 355 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 PNPLA1Q8N8W4 532 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 C3orf58Q8NDZ4 430 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 MAPK15Q8TD08 544 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 PYDC1Q8WXC3 89 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 CDKL2Q92772 493 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 WNT8BQ93098 351 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 NT5C3BQ969T7 300 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 HNRNPABQ99729 332 aaKnown RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 WDR6Q9NNW5 1121 aaKnown RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 TXNDC16Q9P2K2 825 aa17.23■□□□□ 0.35
PHGDH-223ENST00000641597 STX18Q9P2W9 335 aaKnown RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 G3BP2Q9UN86 482 aaKnown RBP17.23■□□□□ 0.35
PHGDH-223ENST00000641597 ARHGAP42A6NI28 874 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ZNF195O14628 629 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 GLRA3O75311 464 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 DAB1O75553 588 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 CD4P01730 458 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 NCAM1P13591 858 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 NCF2P19878 526 aaPredicted RBP17.22■□□□□ 0.35
PHGDH-223ENST00000641597 NOS2P35228 1153 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ADRA1BP35368 520 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 ACADSBP45954 432 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 GLUD2P49448 558 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 PDK1Q15118 436 aa17.22■□□□□ 0.35
PHGDH-223ENST00000641597 TSNAXIP1Q2TAA8 658 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms