RNA–Protein interactions for RNA: ENST00000640507.1

SPIN3-240, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-240ENST00000640507 CEP76Q8TAP6 659 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 FOXJ1Q92949 421 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 IGSF8Q969P0 613 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 TOE1Q96GM8 510 aaKnown RBP16.32■□□□□ 0.2
SPIN3-240ENST00000640507 MRGPRX3Q96LB0 322 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 EDEM2Q9BV94 578 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 NUP58Q9BVL2 599 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 NUSAP1Q9BXS6 441 aaKnown RBP16.32■□□□□ 0.2
SPIN3-240ENST00000640507 TKTL2Q9H0I9 626 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 ARHGEF38Q9NXL2 777 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 THADAQ6YHU6 1953 aa16.32■□□□□ 0.2
SPIN3-240ENST00000640507 ADCY5O95622 1261 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 TFE3P19532 575 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-240ENST00000640507 MMP8P22894 467 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 FLT3P36888 993 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 PLK1P53350 603 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 OXCT1P55809 520 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 ZBTB16Q05516 673 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 DEUP1Q05D60 604 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 ARID5BQ14865 1188 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 DUOXA1Q1HG43 343 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 DHX40Q8IX18 779 aaKnown RBP16.31■□□□□ 0.2
SPIN3-240ENST00000640507 APCDD1Q8J025 514 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 CADM4Q8NFZ8 388 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 HSPA12BQ96MM6 686 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 RPRD1AQ96P16 312 aaPredicted RBP16.31■□□□□ 0.2
SPIN3-240ENST00000640507 PPP1R9BQ96SB3 815 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 TBCBQ99426 244 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 VANGL2Q9ULK5 521 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 ERVW-1Q9UQF0 538 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
SPIN3-240ENST00000640507 PLXND1Q9Y4D7 1925 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 MED19A0JLT2 244 aaPredicted RBP16.3■□□□□ 0.2
SPIN3-240ENST00000640507 FAM170AA1A519 330 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 GOLGA8SH3BPF8 625 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 CDX4O14627 284 aaPredicted RBP16.3■□□□□ 0.2
SPIN3-240ENST00000640507 UNGP13051 313 aaPredicted RBP16.3■□□□□ 0.2
SPIN3-240ENST00000640507 ECT2LQ008S8 904 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 HNRNPA1L2Q32P51 320 aaKnown RBP16.3■□□□□ 0.2
SPIN3-240ENST00000640507 SYCP2LQ5T4T6 812 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 ACBD5Q5T8D3 534 aaPredicted RBP16.3■□□□□ 0.2
SPIN3-240ENST00000640507 BNIPLQ7Z465 357 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 RABEPKQ7Z6M1 372 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 C14orf80Q86SX3 495 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 C1orf74Q96LT6 269 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 GPR174Q9BXC1 333 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 SIK2Q9H0K1 926 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 ANLNQ9NQW6 1124 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 SLC6A14Q9UN76 642 aa16.3■□□□□ 0.2
SPIN3-240ENST00000640507 ATXN2Q99700 1313 aaKnown RBP16.3■□□□□ 0.2
SPIN3-240ENST00000640507 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 TARSL2A2RTX5 802 aaKnown RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 C4orf47A7E2U8 309 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 I6L893 689 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 CLDN11O75508 207 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 ENDOD1O94919 500 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 SERPINF2P08697 491 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 MZF1P28698 734 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 CTSOP43234 321 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 ZNF165P49910 485 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 RPS14P62263 151 aaKnown RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 SULT2A1Q06520 285 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 ZNF177Q13360 481 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 WDR45BQ5MNZ6 344 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 CXorf57Q6NSI4 855 aaKnown RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 TRNP1Q6NT89 227 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 CIR1Q86X95 450 aaPredicted RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 RGL4Q8IZJ4 473 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 SLC30A5Q8TAD4 765 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 PCDHB18PQ96TA0 734 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 MTG2Q9H4K7 406 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 TMEM9BQ9NQ34 198 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
SPIN3-240ENST00000640507 SLCO3A1Q9UIG8 710 aa16.29■□□□□ 0.2
SPIN3-240ENST00000640507 METTL12A8MUP2 240 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 TEX33O43247 280 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 DNTTP04053 509 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 CCDC172P0C7W6 258 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 PDGFRAP16234 1089 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 NNMTP40261 264 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 CDH4P55283 916 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 CENPCQ03188 943 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 KLHL40Q2TBA0 621 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 C9orf64Q5T6V5 341 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 DAB2IPQ5VWQ8 1189 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 RNF219Q5W0B1 726 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-240ENST00000640507 CACUL1Q86Y37 369 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 DNASE2BQ8WZ79 361 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 ALG14Q96F25 216 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 RPL10LQ96L21 214 aaKnown RBP16.28■□□□□ 0.2
SPIN3-240ENST00000640507 CFAP57Q96MR6 1250 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 HAPLN3Q96S86 360 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 FUCA2Q9BTY2 467 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 RSPH9Q9H1X1 276 aaPredicted RBP16.28■□□□□ 0.2
SPIN3-240ENST00000640507 METTL5Q9NRN9 209 aaKnown RBP16.28■□□□□ 0.2
SPIN3-240ENST00000640507 SCML1Q9UN30 329 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 TBC1D30Q9Y2I9 924 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 ITIH6Q6UXX5 1313 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 DRGXA6NNA5 263 aa16.28■□□□□ 0.2
SPIN3-240ENST00000640507 TTC34A8MYJ7 566 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms