RNA–Protein interactions for RNA: ENST00000640076.1

SCARB2-220, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 1,991 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-220ENST00000640076 EMILIN2Q9BXX0 1053 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 NKX2-4Q9H2Z4 354 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 BRD7Q9NPI1 651 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 ENTPD7Q9NQZ7 604 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 CORINQ9Y5Q5 1042 aa8.3□□□□□ -1.08
SCARB2-220ENST00000640076 GREB1Q4ZG55 1949 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF638Q14966 1978 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 TMEM191CA6NGB0 347 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 C2orf71A6NGG8 1288 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 H3BNC9 293 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 GFRA2O00451 464 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 TPP1O14773 563 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 FANCGO15287 622 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 BUB1BO60566 1050 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 PALMO75781 387 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SOAT2O75908 522 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 FKBP9O95302 570 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SEC24AO95486 1093 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 IL33O95760 270 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 KRT3P12035 628 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 ATF2P15336 505 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SOX18P35713 384 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 GPR15P49685 360 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 TKTL1P51854 596 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 RPL7AP62424 266 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SLC6A3Q01959 620 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SMC1AQ14683 1233 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 PDCD2Q16342 344 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 MGAT5BQ3V5L5 792 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 DNAJC21Q5F1R6 531 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 FAM102AQ5T9C2 384 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 FKBP9P1Q75LS8 142 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SIX6OS1Q8N1H7 587 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 MRPL43Q8N983 215 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 NAXEQ8NCW5 288 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 LRRN4CLQ8ND94 238 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 FEZF2Q8TBJ5 459 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 CLEC4CQ8WTT0 213 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 AHCYL2Q96HN2 611 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 BTBD6Q96KE9 485 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 PPM1MQ96MI6 270 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 MCEEQ96PE7 176 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 TAAR9Q96RI9 348 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 SEPT5Q99719 369 aaPredicted RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 PAIP2Q9BPZ3 127 aaKnown RBP8.29□□□□□ -1.08
SCARB2-220ENST00000640076 CRB3Q9BUF7 120 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 ULBP1Q9BZM6 244 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 CNGB3Q9NQW8 809 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 HSFX1Q9UBD0 423 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 ANAPC7Q9UJX3 599 aa8.29□□□□□ -1.08
SCARB2-220ENST00000640076 A6NNZ2 444 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ZNF891A8MT65 544 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 HIDE1A8MVS5 230 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 KIF2AO00139 706 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 FSCN2O14926 492 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CSPG5O95196 566 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TNNT1P13805 278 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CA8P35219 290 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 RFC1P35251 1148 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 MAPK9P45984 424 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TUFMP49411 452 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SLC5A3P53794 718 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 IL2P60568 153 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 MRPS5P82675 430 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 GPM6BQ13491 265 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TAF5Q15542 800 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 BBS9Q3SYG4 887 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 PLA2G2CQ5R387 149 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SDHAF4Q5VUM1 108 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 PLPP4Q5VZY2 271 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 C11orf63Q6NUN7 778 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 DCUN1D2Q6PH85 259 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SYT10Q6XYQ8 523 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SLC26A9Q7LBE3 791 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SLFN11Q7Z7L1 901 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SLC35F6Q8N357 371 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 JOSD2Q8TAC2 188 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SCAMP5Q8TAC9 235 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 NDRG1Q92597 394 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 NELL1Q92832 810 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 MAGEB10Q96LZ2 347 aaPredicted RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 KLHL5Q96PQ7 755 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ALS2CR12Q96Q35 445 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CENPOQ9BU64 300 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 GOLPH3Q9H4A6 298 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 CERS4Q9HA82 394 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SLC28A3Q9HAS3 691 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 RASSF1Q9NS23 344 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TMEM59LQ9UK28 342 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 PLXNA3P51805 1871 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 MYO1FO00160 1098 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 DDX3YO15523 660 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 SART1O43290 800 aaKnown RBP8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TGM5O43548 720 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ZBED1O96006 694 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 TUBB4AP04350 444 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 ATF6P18850 670 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 NRLP54845 237 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 DAOAP59103 153 aa8.28□□□□□ -1.08
SCARB2-220ENST00000640076 RPL10AP62906 217 aaKnown RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms