RNA–Protein interactions for RNA: ENST00000638155.1

UBE3A-228, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 9,131 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-228ENST00000638155 RPS2P15880 293 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SDC2P34741 201 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 CLK3P49761 638 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 IRGCQ6NXR0 463 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ATCAYQ86WG3 371 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 EMC1Q8N766 993 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 FBXO36Q8NEA4 188 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 RSL1D1O76021 490 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ETS1P14921 441 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 MAPK9P45984 424 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SREBF2Q12772 1141 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 PRR23BQ6ZRT6 265 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF621Q6ZSS3 439 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ADSSL1Q8N142 457 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 OR8H1Q8NGG4 311 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 S100PBPQ96BU1 408 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF350Q9GZX5 532 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ARHGEF12Q9NZN5 1544 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SSU72P8A0A1W2PR75 194 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ATMINO43313 823 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 NEK3P51956 506 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 CAV3P56539 151 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SSTP61278 116 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 DCP1BQ8IZD4 617 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 DPF3Q92784 378 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 OXNAD1Q96HP4 312 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 MTG1Q9BT17 334 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 CARD8Q9Y2G2 431 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 AFF2P51816 1311 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 SEC22BO75396 215 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 LRG1P02750 347 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 MGAT5BQ3V5L5 792 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 OAFQ86UD1 273 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 HDDC3Q8N4P3 179 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 HPS3Q969F9 1004 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 INTS7Q9NVH2 962 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 THAP1Q9NVV9 213 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 TMEM216Q9P0N5 145 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 VANGL2Q9ULK5 521 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 ST3GAL5Q9UNP4 418 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L15C9J2P7 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L13C9JLJ4 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L11C9JVI0 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L18D6R9N7 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L22D6RA61 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L17D6RBQ6 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L19D6RCP7 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L20D6RJB6 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 PECAM1P16284 738 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L24Q0WX57 530 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 INTS11Q5TA45 600 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 USP17L6PQ6QN14 398 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 DNAJA4Q8WW22 397 aaPredicted RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 C12orf66Q96MD2 445 aa13.36□□□□□ -0.27
UBE3A-228ENST00000638155 METTL8Q9H825 291 aaKnown RBP13.36□□□□□ -0.27
UBE3A-228ENST00000638155 UBOX5O94941 541 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ITGA2P17301 1181 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 FAM187BQ17R55 369 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 CYP2R1Q6VVX0 501 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF540Q8NDQ6 660 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 TEX47Q8TBZ9 253 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 SPATA5L1Q9BVQ7 753 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 UPB1Q9UBR1 384 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ZNF208O43345 1280 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ME2P23368 584 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 SPIDRQ14159 915 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ACOT12Q8WYK0 555 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 LRRC40Q9H9A6 602 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 GPR108Q9NPR9 543 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 NECTIN3Q9NQS3 549 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 BSDC1Q9NW68 430 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 STAP2Q9UGK3 403 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 A2MP01023 1474 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 BGNP21810 368 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 PRKAA2P54646 552 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 CBX3Q13185 183 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 GPALPP1Q8IXQ4 340 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 OFCC1Q8IZS5 231 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 PTCD2Q8WV60 388 aaKnown RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 SP140LQ9H930 580 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 PRDM8Q9NQV8 689 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ABCG2Q9UNQ0 655 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 TEX33O43247 280 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ODC1P11926 461 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 MAZP56270 477 aaKnown RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 TUBA1BP68363 451 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 TUBA1AQ71U36 451 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 COG5Q9UP83 839 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 M0R036 132 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 SMIM11AP58511 58 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 STRIP1Q5VSL9 837 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 BRSK2Q8IWQ3 736 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 INO80EQ8NBZ0 244 aaPredicted RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 PHF10Q8WUB8 498 aaKnown RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 PAFAH2Q99487 392 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 ATXN2Q99700 1313 aaKnown RBP13.35□□□□□ -0.27
UBE3A-228ENST00000638155 CCNKO75909 580 aa13.35□□□□□ -0.27
UBE3A-228ENST00000638155 H2AFXP16104 143 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms