RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 GJB6O95452 261 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 MBD3O95983 291 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 ABCB4P21439 1286 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 SOX5P35711 763 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 RPS14P62263 151 aaKnown RBP18.3■□□□□ 0.52
PNKP-230ENST00000638016 FMO1Q01740 532 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 AUHQ13825 339 aaKnown RBP18.3■□□□□ 0.52
PNKP-230ENST00000638016 PLEKHG6Q3KR16 790 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 FKBP15Q5T1M5 1219 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 CXorf57Q6NSI4 855 aaKnown RBP18.3■□□□□ 0.52
PNKP-230ENST00000638016 SLC23A3Q6PIS1 610 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 RGL4Q8IZJ4 473 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 C18orf8Q96DM3 657 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 RPRD1AQ96P16 312 aaPredicted RBP18.3■□□□□ 0.52
PNKP-230ENST00000638016 NUSAP1Q9BXS6 441 aaKnown RBP18.3■□□□□ 0.52
PNKP-230ENST00000638016 CAPN10Q9HC96 672 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.3■□□□□ 0.52
PNKP-230ENST00000638016 SLCO3A1Q9UIG8 710 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 ERVW-1Q9UQF0 538 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 KNL1Q8NG31 2342 aa18.3■□□□□ 0.52
PNKP-230ENST00000638016 IGLV3-19P01714 112 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 ACADMP11310 421 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 VAV1P15498 845 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 ACSL1P33121 698 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 EMC1Q8N766 993 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 SLC30A5Q8TAD4 765 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 PCMTD1Q96MG8 357 aaPredicted RBP18.29■□□□□ 0.52
PNKP-230ENST00000638016 CFAP57Q96MR6 1250 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 PCDHB18PQ96TA0 734 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 GTPBP2Q9BX10 602 aaKnown RBP18.29■□□□□ 0.52
PNKP-230ENST00000638016 TKTL2Q9H0I9 626 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 SIK2Q9H0K1 926 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 METTL5Q9NRN9 209 aaKnown RBP18.29■□□□□ 0.52
PNKP-230ENST00000638016 KIAA1522Q9P206 1035 aaPredicted RBP18.29■□□□□ 0.52
PNKP-230ENST00000638016 SERGEFQ9UGK8 458 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 SLC12A6Q9UHW9 1150 aa18.29■□□□□ 0.52
PNKP-230ENST00000638016 MEI4A8MW99 385 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 CNTN5O94779 1100 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 LSM8O95777 96 aaKnown RBP18.28■□□□□ 0.52
PNKP-230ENST00000638016 TPM2P07951 284 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 ADRB1P08588 477 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 UBXN1Q04323 297 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 DUOXA1Q1HG43 343 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 ANO6Q4KMQ2 910 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 N4BP2L1Q5TBK1 243 aaPredicted RBP18.28■□□□□ 0.52
PNKP-230ENST00000638016 DCAF12L1Q5VU92 463 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 SMYD5Q6GMV2 418 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 PSAPL1Q6NUJ1 521 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 ZDHHC17Q8IUH5 632 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 CCDC117Q8IWD4 279 aaPredicted RBP18.28■□□□□ 0.52
PNKP-230ENST00000638016 ZCCHC9Q8N567 271 aaKnown RBP18.28■□□□□ 0.52
PNKP-230ENST00000638016 ZNF557Q8N988 423 aaPredicted RBP18.28■□□□□ 0.52
PNKP-230ENST00000638016 NT5C3BQ969T7 300 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 C11orf70Q9BRQ4 267 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 MIR1-1HGQ9H1L0 117 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 C6orf106Q9H6K1 298 aaPredicted RBP18.28■□□□□ 0.52
PNKP-230ENST00000638016 ARHGEF38Q9NXL2 777 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 TMEM59LQ9UK28 342 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 SLC6A14Q9UN76 642 aa18.28■□□□□ 0.52
PNKP-230ENST00000638016 A0A1B0GVM2 712 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 TCAF2A6NFQ2 919 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 KCNK5O95279 499 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 ASLP04424 464 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 CYP1A1P04798 512 aaPredicted RBP18.27■□□□□ 0.52
PNKP-230ENST00000638016 SERPINF2P08697 491 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 SLC2A3P11169 496 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 CXCR3P49682 368 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 SNX16P57768 344 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 ST8SIA6P61647 398 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 CDR2Q01850 454 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 DEUP1Q05D60 604 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 HNRNPA1L2Q32P51 320 aaKnown RBP18.27■□□□□ 0.52
PNKP-230ENST00000638016 ALFQ53S48 1182 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 RABGAP1LQ5R372 815 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 ARTNQ5T4W7 220 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 C9orf64Q5T6V5 341 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 CAVIN1Q6NZI2 390 aaKnown RBP18.27■□□□□ 0.52
PNKP-230ENST00000638016 ZNF683Q8IZ20 524 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 ALG14Q96F25 216 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 SPAG5Q96R06 1193 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 RSPH9Q9H1X1 276 aaPredicted RBP18.27■□□□□ 0.52
PNKP-230ENST00000638016 STAP1Q9ULZ2 295 aa18.27■□□□□ 0.52
PNKP-230ENST00000638016 TEX33O43247 280 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 CDK11BP21127 795 aaKnown RBP18.26■□□□□ 0.51
PNKP-230ENST00000638016 HOXD12P35452 270 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 STAT1P42224 750 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 METAP1P53582 386 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 ECT2LQ008S8 904 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 E2F5Q15329 346 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 SH3PXD2AQ5TCZ1 1133 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 ZNF776Q68DI1 518 aaPredicted RBP18.26■□□□□ 0.51
PNKP-230ENST00000638016 FAM131BQ86XD5 332 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 STK40Q8N2I9 435 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 NEK11Q8NG66 645 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 JOSD2Q8TAC2 188 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 SNX19Q92543 992 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 FOXJ1Q92949 421 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 NUP58Q9BVL2 599 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 WDCPQ9H6R7 721 aa18.26■□□□□ 0.51
PNKP-230ENST00000638016 SUN2Q9UH99 717 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms