RNA–Protein interactions for RNA: ENST00000637809.1

CACNA1A-250, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 871 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-250ENST00000637809 MIS12Q9H081 205 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 SLCO3A1Q9UIG8 710 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 FZD4Q9ULV1 537 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 ERVW-1Q9UQF0 538 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 NAALADL1Q9UQQ1 740 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 TLR6Q9Y2C9 796 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 PCDHB4Q9Y5E5 795 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 PCDHGA1Q9Y5H4 931 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 ITIH6Q6UXX5 1313 aa12.57□□□□□ -0.4
CACNA1A-250ENST00000637809 PTPRBP23467 1997 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 E9PAM4 449 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 RNASEH1O60930 286 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 RNASEH2AO75792 299 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 LUC7L3O95232 432 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 SRPRAP08240 638 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 SLC8A1P32418 973 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 CCR5P51681 352 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 ADPRHP54922 357 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 CLDN6P56747 220 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 CDH18Q13634 790 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 STILQ15468 1287 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 SYPL2Q5VXT5 272 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 BEND5Q7L4P6 421 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 TAC4Q86UU9 113 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 APCDD1Q8J025 514 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 ADAM32Q8TC27 787 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 ERCC4Q92889 916 aaPredicted RBP12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 SERPINB11Q96P15 392 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 NT5C1BQ96P26 610 aa12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 DDX50Q9BQ39 737 aaKnown RBP12.56□□□□□ -0.4
CACNA1A-250ENST00000637809 EDDM13A0A1B0GTR0 161 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 LRRC72A6NJI9 287 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 PLK4O00444 970 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 ENC1O14682 589 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 LDOC1O95751 146 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 GOT1P17174 413 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 CD38P28907 300 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 GPD2P43304 727 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 PSMD8P48556 350 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 ACADVLP49748 655 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 ECT2LQ008S8 904 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 SFSWAPQ12872 951 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 EIF4EBP2Q13542 120 aaPredicted RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 ARHGEF19Q8IW93 802 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 STK40Q8N2I9 435 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 PPM1KQ8N3J5 372 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 TSC1Q92574 1164 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 PTPRN2Q92932 1015 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 FAM131CQ96AQ9 280 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 CCDC34Q96HJ3 373 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 CNDP2Q96KP4 475 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 RPL10LQ96L21 214 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 OMDQ99983 421 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 METTL14Q9HCE5 456 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 AASDHPPTQ9NRN7 309 aa12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 URB1O60287 2271 aaKnown RBP12.55□□□□□ -0.4
CACNA1A-250ENST00000637809 TYW5A2RUC4 315 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 LATO43561 262 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 RFPL3O75679 317 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 MOCS2O96007 188 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 IGLV3-25P01717 112 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 ITGAVP06756 1048 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 VAV1P15498 845 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 CD44P16070 742 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 C5AR1P21730 350 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 MZF1P28698 734 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 EPHA8P29322 1005 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 DRD3P35462 400 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 STK19P49842 368 aaPredicted RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 METAP1P53582 386 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 NXPH1P58417 271 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 PPP2CBP62714 309 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 PPP2CAP67775 309 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 GCNT1Q02742 428 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 SFMBT2Q5VUG0 894 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 RAP1GAP2Q684P5 730 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 DENND1BQ6P3S1 775 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 RRAGAQ7L523 313 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 KANSL1Q7Z3B3 1105 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 SPATS2Q86XZ4 545 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 LGI2Q8N0V4 545 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 OR14C36Q8NHC7 312 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 FRS2Q8WU20 508 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 SKA1Q96BD8 255 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 FAM149B1Q96BN6 582 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 SERAC1Q96JX3 654 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 CEP63Q96MT8 703 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 KREMEN1Q96MU8 473 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 GDF3Q9NR23 364 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 ARHGAP20Q9P2F6 1191 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 CYTH4Q9UIA0 394 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 CNTN6Q9UQ52 1028 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 ATP6V1DQ9Y5K8 247 aa12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 HELZ2Q9BYK8 2649 aaKnown RBP12.54□□□□□ -0.4
CACNA1A-250ENST00000637809 CFAP46Q8IYW2 2715 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 TLR4O00206 839 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 P4HA2O15460 535 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 YKT6O15498 198 aa12.53□□□□□ -0.4
CACNA1A-250ENST00000637809 SART1O43290 800 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms