RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 ANO7Q6IWH7 933 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 TMEM270Q6UE05 265 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 C4orf50Q6ZRC1 276 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 GPR149Q86SP6 731 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 PHF13Q86YI8 300 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 CRYBG2Q8N1P7 616 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 ALLCQ8N6M5 410 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 CMASQ8NFW8 434 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 C2orf15Q8WU43 125 aaKnown RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 DNAJC9Q8WXX5 260 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 ZNF75CPQ92670 426 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 VPS11Q9H270 941 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 IP6K2Q9UHH9 426 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 PCDHB4Q9Y5E5 795 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 OBSL1O75147 1896 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 SMAPO00193 183 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 SPAG7O75391 227 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 HNRNPA1P09651 372 aaKnown RBP eCLIP15.95■□□□□ 0.14
CLN8-209ENST00000635970 LINGO3P0C6S8 592 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 TSHRP16473 764 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 RPA3P35244 121 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 PTDSS1P48651 473 aaKnown RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 NTHL1P78549 312 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 C1QBPQ07021 282 aaKnown RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 MAPRE1Q15691 268 aaKnown RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 DDR2Q16832 855 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 EFHC2Q5JST6 749 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 CES5AQ6NT32 575 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 IRGCQ6NXR0 463 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 PAQR9Q6ZVX9 377 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 NLRP9Q7RTR0 991 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 FAM35AQ86V20 835 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 SLC2A14Q8TDB8 520 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 SUSD6Q92537 303 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 TMEM176AQ96HP8 235 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 PWWP2AQ96N64 755 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 HEMGNQ9BXL5 484 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 MMADHCQ9H3L0 296 aaPredicted RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 PIDD1Q9HB75 910 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 MAFFQ9ULX9 164 aa15.95■□□□□ 0.14
CLN8-209ENST00000635970 ZNF638Q14966 1978 aaKnown RBP15.95■□□□□ 0.14
CLN8-209ENST00000635970 POC1B-GALNT4F8VUJ3 575 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 TGDSO95455 350 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 ADORA2BP29275 332 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 VHLP40337 213 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 GEMIN4P57678 1058 aaKnown RBP15.94■□□□□ 0.14
CLN8-209ENST00000635970 YWHAEP62258 255 aaKnown RBP15.94■□□□□ 0.14
CLN8-209ENST00000635970 LLGL1Q15334 1064 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 SEPT7Q16181 437 aaKnown RBP15.94■□□□□ 0.14
CLN8-209ENST00000635970 TAF1BQ53T94 588 aaPredicted RBP15.94■□□□□ 0.14
CLN8-209ENST00000635970 OTOAQ7RTW8 1153 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 GRASPQ7Z6J2 395 aaPredicted RBP15.94■□□□□ 0.14
CLN8-209ENST00000635970 SCN4BQ8IWT1 228 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 GIPC2Q8TF65 315 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 FUBP3Q96I24 572 aaKnown RBP eCLIP15.94■□□□□ 0.14
CLN8-209ENST00000635970 MED10Q9BTT4 135 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 FRMD8P1Q9BZ68 369 aaPredicted RBP15.94■□□□□ 0.14
CLN8-209ENST00000635970 POMKQ9H5K3 350 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 KIF9Q9HAQ2 790 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 PARVAQ9NVD7 372 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 MUC3AQ02505 3323 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 MYO16Q9Y6X6 1858 aa15.94■□□□□ 0.14
CLN8-209ENST00000635970 DNAJC6O75061 913 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 PAPLNO95428 1278 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 ITGAVP06756 1048 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 SP100P23497 879 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 EPHB2P29323 1055 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 ALDH1A3P47895 512 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 TUFMP49411 452 aaKnown RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 MAMLD1Q13495 774 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 CBX2Q14781 532 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 KLHL38Q2WGJ6 581 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 PPP1R26Q5T8A7 1209 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 CLNKQ7Z7G1 428 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.93■□□□□ 0.14
CLN8-209ENST00000635970 KCNV2Q8TDN2 545 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 CPA5Q8WXQ8 436 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 HEXIM2Q96MH2 286 aaKnown RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 BTBD10Q9BSF8 475 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 DENND2DQ9H6A0 471 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 SLCO1B3Q9NPD5 702 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 KRT82Q9NSB4 513 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 DNMT3BQ9UBC3 853 aaKnown RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 HSFX1Q9UBD0 423 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 ZNF148Q9UQR1 794 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 LRCH1Q9Y2L9 728 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 NRG2O14511 850 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 HGSO14964 777 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 XYLBO75191 536 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 GSTA2P09210 222 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 PECAM1P16284 738 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 MRPS5P82675 430 aaKnown RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 SARNPP82979 210 aaKnown RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 OCRLQ01968 901 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 MUM1Q2TAK8 710 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 TTC39CQ8N584 583 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 NKD2Q969F2 451 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 CORO1BQ9BR76 489 aa15.93■□□□□ 0.14
CLN8-209ENST00000635970 FAM124BQ9H5Z6 455 aaPredicted RBP15.93■□□□□ 0.14
CLN8-209ENST00000635970 VPS37BQ9H9H4 285 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms