RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 SCYL2Q6P3W7 929 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 TMEM92Q6UXU6 159 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 H2AFVQ71UI9 128 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 TRMT11Q7Z4G4 463 aaKnown RBP10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FAM72BQ86X60 149 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CCDC117Q8IWD4 279 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-210ENST00000635675 AHI1Q8N157 1196 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CAMKK1Q8N5S9 505 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 UCMAQ8WVF2 138 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 SORCS1Q8WY21 1168 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CTNNBL1Q8WYA6 563 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-210ENST00000635675 TTC17Q96AE7 1141 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FAM126AQ9BYI3 521 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-210ENST00000635675 CIPCQ9C0C6 399 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 MPP6Q9NZW5 540 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 IMPACTQ9P2X3 320 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 THAP10Q9P2Z0 257 aaPredicted RBP10.03□□□□□ -0.8
LINC00339-210ENST00000635675 PPARGC1AQ9UBK2 798 aaKnown RBP10.03□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF212Q9UDV6 495 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 FZD10Q9ULW2 581 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 SLC8A2Q9UPR5 921 aa10.03□□□□□ -0.8
LINC00339-210ENST00000635675 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 A0A1W2PQF6 199 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 WASH3PC4AMC7 463 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 LRCH4O75427 683 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 RNF8O76064 485 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 LRIG2O94898 1065 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 LCA5LO95447 670 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 DLDP09622 509 aaKnown RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 TMEM253P0C7T8 217 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 POLR2EP19388 210 aaKnown RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 MIPP30301 263 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 L1CAMP32004 1257 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 PCK1P35558 622 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 DGKEP52429 567 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 NRLP54845 237 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 OXCT1P55809 520 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF177Q13360 481 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 SLC12A1Q13621 1099 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 PIGHQ14442 188 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 E2F5Q15329 346 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 PTPRNQ16849 979 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 PITRM1Q5JRX3 1037 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 CYP4V2Q6ZWL3 525 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.02□□□□□ -0.81
LINC00339-210ENST00000635675 TMTC1Q8IUR5 882 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 CCDC170Q8IYT3 715 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 CHPFQ8IZ52 775 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 APCDD1Q8J025 514 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 PYROXD2Q8N2H3 581 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 NIPA2Q8N8Q9 360 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 ZBTB44Q8NCP5 570 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 OR52K2Q8NGK3 314 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 ALG14Q96F25 216 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 PEBP4Q96S96 227 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 GABRG3Q99928 467 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 NCAPGQ9BPX3 1015 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 FEM1AQ9BSK4 669 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 ZYG11BQ9C0D3 744 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 CD248Q9HCU0 757 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 ZSCAN32Q9NX65 697 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 CACNA2D2Q9NY47 1150 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 UVRAGQ9P2Y5 699 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 IP6K2Q9UHH9 426 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 INTUQ9ULD6 942 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 NEU3Q9UQ49 428 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 OR51B4Q9Y5P0 310 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 STON1Q9Y6Q2 735 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 FANCMQ8IYD8 2048 aa10.02□□□□□ -0.81
LINC00339-210ENST00000635675 CCDC163A0A0D9SF12 145 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 MYO1FO00160 1098 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 ATP5BP06576 529 aaKnown RBP10.01□□□□□ -0.81
LINC00339-210ENST00000635675 MZF1P28698 734 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-210ENST00000635675 CSKP41240 450 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 IL12RB1P42701 662 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 WASP42768 502 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 NHLH1Q02575 133 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 DMWDQ09019 674 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 SEMA3BQ13214 749 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF234Q14588 700 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 PLEKHG6Q3KR16 790 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 EFHC2Q5JST6 749 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 ERMARDQ5T6L9 678 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 SDE2Q6IQ49 451 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 SETD3Q86TU7 594 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-210ENST00000635675 ZNF564Q8TBZ8 553 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-210ENST00000635675 CYB5D2Q8WUJ1 264 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 ATOH1Q92858 354 aaPredicted RBP10.01□□□□□ -0.81
LINC00339-210ENST00000635675 BTBD6Q96KE9 485 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 HHIPQ96QV1 700 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 PPP1R9BQ96SB3 815 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 TMEM245Q9H330 911 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 RETREG1Q9H6L5 497 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 CTTNBP2NLQ9P2B4 639 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 EBF1Q9UH73 591 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 PCSK1NQ9UHG2 260 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 ANAPC7Q9UJX3 599 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 USP18Q9UMW8 372 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 PLA2G4CQ9UP65 541 aa10.01□□□□□ -0.81
LINC00339-210ENST00000635675 PCDHGA2Q9Y5H1 932 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms