RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 ARHGEF6Q15052 776 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 NPY5RQ15761 445 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CYP2A13Q16696 494 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GEN1Q17RS7 908 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 BEAN1Q3B7T3 259 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 ZIK1Q3SY52 487 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CCDC183Q5T5S1 534 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 FCRL6Q6DN72 434 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 IYDQ6PHW0 289 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 LPCAT2Q7L5N7 544 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 KRT28Q7Z3Y7 464 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PRPF39Q86UA1 669 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CPOQ8IVL8 374 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CEP97Q8IW35 865 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SYTL1Q8IYJ3 562 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GALNT15Q8N3T1 639 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CCDC33Q8N5R6 958 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SPERTQ8NA61 448 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 FANCBQ8NB91 859 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 NSUN7Q8NE18 718 aaKnown RBP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 DENND6BQ8NEG7 585 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SUPT20HQ8NEM7 779 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CYP2W1Q8TAV3 490 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GDAP1Q8TB36 358 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 CREB3L4Q8TEY5 395 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PTP4A1Q93096 173 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SPSB4Q96A44 273 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 IQCDQ96DY2 449 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GIMAP5Q96F15 307 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 BOD1Q96IK1 185 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 C8orf76Q96K31 380 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PHACTR3Q96KR7 559 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 COQ10AQ96MF6 247 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 SLC46A1Q96NT5 459 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PPP1R9BQ96SB3 815 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 ADAM2Q99965 735 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 HGH1Q9BTY7 390 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 STK33Q9BYT3 514 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 AGXT2Q9BYV1 514 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 VCPKMTQ9H867 229 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 GJB4Q9NTQ9 266 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 ADPRHL2Q9NX46 363 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 TRPM5Q9NZQ8 1165 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 KCNE5Q9UJ90 142 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 MID2Q9UJV3 735 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 PCDHGB2Q9Y5G2 931 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.15□□□□□ -1.91
PSPC1-208ENST00000635562 COX11Q9Y6N1 276 aa3.15□□□□□ -1.91
PSPC1-208ENST00000635562 NSD2O96028 1365 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PRAMEF33A0A0G2JMD5 474 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 A0A0G2JPF8 293 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 GOLGA6L10A0A0M3HER8 536 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MYADML2A6NDP7 307 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 TMEM200CA6NKL6 621 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 HNRNPCL3B7ZW38 293 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SGK1O00141 431 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DDX39AO00148 427 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 RIPK2O43353 540 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PRPSAP2O60256 369 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 NMT2O60551 498 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PRAMEF10O60809 474 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DDHD2O94830 711 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SCAF4O95104 1147 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 RTN3O95197 1032 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PGM3O95394 542 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 GPANK1O95872 356 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 CYP1A2P05177 515 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 HEXBP07686 556 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PDHA1P08559 390 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SNRNP70P08621 437 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ATXN1LP0C7T5 689 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SPATA31D3P0C874 917 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 HNRNPCL4P0DMR1 293 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 XRCC6P12956 609 aaKnown RBP eCLIP3.14□□□□□ -1.919e-14■■□□□ 11.4
PSPC1-208ENST00000635562 EEF1GP26641 437 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ACVR2AP27037 513 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 GABRB3P28472 473 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 KRT2P35908 639 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 BMPR1AP36894 532 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ATP5OP48047 213 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 GCLCP48506 637 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MAPK10P53779 464 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 CASP6P55212 293 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 LOXL3P58215 753 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ARF3P61204 181 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 RBP5P82980 135 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ARF1P84077 181 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MC2RQ01718 297 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 SCAPQ12770 1279 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 MAPK7Q13164 816 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 TRPC3Q13507 836 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 PRPF4BQ13523 1007 aaKnown RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 DYRK1AQ13627 763 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 ACVR2BQ13705 512 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 EFR3AQ14156 821 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 HLXQ14774 488 aaPredicted RBP3.14□□□□□ -1.91
PSPC1-208ENST00000635562 STARD3Q14849 445 aa3.14□□□□□ -1.91
PSPC1-208ENST00000635562 NAA25Q14CX7 972 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms