RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 HAPLN3Q96S86 360 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 SLC6A17Q9H1V8 727 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 TMEM245Q9H330 911 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CD248Q9HCU0 757 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CYP8B1Q9UNU6 501 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 CFAP54Q96N23 3096 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 RALGAPA1Q6GYQ0 2036 aa16.18■□□□□ 0.18
LINC00339-207ENST00000634712 ABCA7Q8IZY2 2146 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 C2CD4BA6NLJ0 364 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 SIGLEC16A6NMB1 481 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 AP5Z1O43299 807 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 SRGAP2O75044 1071 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 NDUFS2O75306 463 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 ENDOD1O94919 500 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 GJB6O95452 261 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 GPD1P21695 349 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 PTPN9P43378 593 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 CDH4P55283 916 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 ECT2LQ008S8 904 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 RPL6Q02878 288 aaKnown RBP16.17■□□□□ 0.18
LINC00339-207ENST00000634712 LMNB2Q03252 620 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 SULT2A1Q06520 285 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 PTPRNQ16849 979 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 C15orf59Q2T9L4 293 aaPredicted RBP16.17■□□□□ 0.18
LINC00339-207ENST00000634712 PLEKHG6Q3KR16 790 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 DCUN1D2Q6PH85 259 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 LRSAM1Q6UWE0 723 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 C14orf80Q86SX3 495 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 TMEFF1Q8IYR6 380 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 MCOLN2Q8IZK6 566 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 FRMD1Q8N878 549 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 ZNF366Q8N895 744 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 C12orf50Q8NA57 414 aaPredicted RBP16.17■□□□□ 0.18
LINC00339-207ENST00000634712 OR2T3Q8NH03 318 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 PARD6AQ9NPB6 346 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 INTS6Q9UL03 887 aaKnown RBP16.17■□□□□ 0.18
LINC00339-207ENST00000634712 ERVW-1Q9UQF0 538 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 ZNF292O60281 2723 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 THADAQ6YHU6 1953 aa16.17■□□□□ 0.18
LINC00339-207ENST00000634712 A0A1W2PQJ5 194 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 PRR5-ARHGAP8B1AHC4 643 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 SRPRAP08240 638 aaKnown RBP16.16■□□□□ 0.18
LINC00339-207ENST00000634712 RFC1P35251 1148 aaPredicted RBP16.16■□□□□ 0.18
LINC00339-207ENST00000634712 MPLP40238 635 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 PRKCIP41743 596 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 ARHGAP8P85298 464 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 CAMK2GQ13555 558 aaPredicted RBP16.16■□□□□ 0.18
LINC00339-207ENST00000634712 NFKBIBQ15653 356 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 CCDC6Q16204 474 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 SPDYCQ5MJ68 293 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 WDR59Q6PJI9 974 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 STRADAQ7RTN6 431 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 CYP2U1Q7Z449 544 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 METTL3Q86U44 580 aaKnown RBP16.16■□□□□ 0.18
LINC00339-207ENST00000634712 APCDD1Q8J025 514 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 FAM172AQ8WUF8 416 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 VCPIP1Q96JH7 1222 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 TTYH3Q9C0H2 523 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 MKRN2Q9H000 416 aaKnown RBP16.16■□□□□ 0.18
LINC00339-207ENST00000634712 FBRSQ9HAH7 460 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 ANLNQ9NQW6 1124 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 VPS45Q9NRW7 570 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 MBD1Q9UIS9 605 aaPredicted RBP16.16■□□□□ 0.18
LINC00339-207ENST00000634712 SNX10Q9Y5X0 201 aa16.16■□□□□ 0.18
LINC00339-207ENST00000634712 IGHV1OR15-9A0A0B4J2B8 117 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 BCLAF3A2AJT9 711 aaKnown RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 E9PAM4 449 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 CBFA2T2O43439 604 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 ZNF806P0C7X5 589 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 SKILP12757 684 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 SDHBP21912 280 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 TGM1P22735 817 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 MZF1P28698 734 aaPredicted RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 OXTRP30559 389 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 C5orf22Q49AR2 442 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 TDRD12Q587J7 1177 aaKnown RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 PRR23CQ6ZRP0 262 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 ARMCX6Q7L4S7 300 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 ZNF571Q7Z3V5 609 aaPredicted RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 BNIPLQ7Z465 357 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 VPS36Q86VN1 386 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 CACUL1Q86Y37 369 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 DEFB119Q8N690 84 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 KDM1BQ8NB78 822 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 PIGKQ92643 395 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 MCEEQ96PE7 176 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 MUC3BQ9H195 1237 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 PRSS16Q9NQE7 514 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 ITM2CQ9NQX7 267 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 TMPRSS4Q9NRS4 437 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 PARVAQ9NVD7 372 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 TAS2R14Q9NYV8 317 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 SLC25A13Q9UJS0 675 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 VPS28Q9UK41 221 aa16.15■□□□□ 0.18
LINC00339-207ENST00000634712 LUC7L2Q9Y383 392 aaKnown RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 BZW2Q9Y6E2 419 aaKnown RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.15■□□□□ 0.18
LINC00339-207ENST00000634712 DRGXA6NNA5 263 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms