RNA–Protein interactions for RNA: ENST00000628516.1

LINC00628-201, long intergenic non-protein coding RNA 628, humanhuman

BASIC

Gene LINC00628, Length 1,289 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00628-201ENST00000628516 CD59P13987 128 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 SPINK2P20155 84 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 ABCB4P21439 1286 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 CLCN1P35523 988 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 EIF4EBP2Q13542 120 aaPredicted RBP16.98■□□□□ 0.31
LINC00628-201ENST00000628516 HNRNPA1L2Q32P51 320 aaKnown RBP16.98■□□□□ 0.31
LINC00628-201ENST00000628516 LRSAM1Q6UWE0 723 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 FAM183BPQ6ZVS7 135 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 LUZP1Q86V48 1076 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 SLC47A2Q86VL8 602 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 ANKRD20A12PQ8NF67 263 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 MRGPRX3Q96LB0 322 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 SLC2A13Q96QE2 648 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 PCED1AQ9H1Q7 454 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 TSPY26PQ9H489 355 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 SYNCQ9H7C4 482 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 ERVW-1Q9UQF0 538 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 CACNA1EQ15878 2313 aa16.98■□□□□ 0.31
LINC00628-201ENST00000628516 SIN3BO75182 1162 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 GJB3O75712 270 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 SEMA4FO95754 770 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 TOP3BO95985 862 aaKnown RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 TPM2P07951 284 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 ATP1A3P13637 1013 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 CCR1P32246 355 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 CTSOP43234 321 aaPredicted RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 COPB1P53618 953 aaKnown RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 SNX16P57768 344 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 SIM1P81133 766 aaPredicted RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 SLC14A1Q13336 389 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 RNF219Q5W0B1 726 aaPredicted RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 SMYD5Q6GMV2 418 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 GANCQ8TET4 914 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 RSPH9Q9H1X1 276 aaPredicted RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 PLCB1Q9NQ66 1216 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 LIMA1Q9UHB6 759 aaKnown RBP16.97■□□□□ 0.31
LINC00628-201ENST00000628516 NCKAP1Q9Y2A7 1128 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 PCNX2A6NKB5 2137 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 NUMA1Q14980 2115 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 ASPMQ8IZT6 3477 aa16.97■□□□□ 0.31
LINC00628-201ENST00000628516 FRYQ5TBA9 3013 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 TTC34A8MYJ7 566 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 SH3BP5O60239 455 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 RNASEH1O60930 286 aaKnown RBP16.96■□□□□ 0.31
LINC00628-201ENST00000628516 ERBB2P04626 1255 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 SRPRAP08240 638 aaKnown RBP16.96■□□□□ 0.31
LINC00628-201ENST00000628516 NUMBP49757 651 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 BPIFB4P59827 614 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 ECT2LQ008S8 904 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 SLC6A3Q01959 620 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 NME3Q13232 169 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 RAPGEF1Q13905 1077 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 PTPN20Q4JDL3 420 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 RABGAP1LQ5R372 815 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 OLFML1Q6UWY5 402 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 CIR1Q86X95 450 aaPredicted RBP16.96■□□□□ 0.31
LINC00628-201ENST00000628516 FAM71AQ8IYT1 594 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 APCDD1Q8J025 514 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 CCAR2Q8N163 923 aaKnown RBP16.96■□□□□ 0.31
LINC00628-201ENST00000628516 KDM1BQ8NB78 822 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 PRMT1Q99873 361 aaKnown RBP16.96■□□□□ 0.31
LINC00628-201ENST00000628516 PDCL3Q9H2J4 239 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 SGK2Q9HBY8 427 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 WASF3Q9UPY6 502 aa16.96■□□□□ 0.31
LINC00628-201ENST00000628516 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.96■□□□□ 0.31
LINC00628-201ENST00000628516 USP24Q9UPU5 2620 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 TARSL2A2RTX5 802 aaKnown RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 FSBPO95073 299 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 PDGFRAP16234 1089 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 FAM193AP78312 1265 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 KCNMA1Q12791 1236 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 HNRNPDQ14103 355 aaKnown RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 DRAP1Q14919 205 aaPredicted RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 C9orf64Q5T6V5 341 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 TTC39BQ5VTQ0 682 aaPredicted RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 IL27RAQ6UWB1 636 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 MMAAQ8IVH4 418 aaKnown RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 C1orf216Q8TAB5 229 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 RPL10LQ96L21 214 aaKnown RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 CAMK1GQ96NX5 476 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 RPRD1AQ96P16 312 aaPredicted RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 SCNM1Q9BWG6 230 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 PABPC3Q9H361 631 aaKnown RBP16.95■□□□□ 0.3
LINC00628-201ENST00000628516 GAREM1Q9H706 876 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 FBXL12Q9NXK8 326 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 SLCO3A1Q9UIG8 710 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 SCML1Q9UN30 329 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 PCDHB9Q9Y5E1 797 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 FHOD1Q9Y613 1164 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 SLCO1B1Q9Y6L6 691 aa16.95■□□□□ 0.3
LINC00628-201ENST00000628516 EDDM13A0A1B0GTR0 161 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 A0A1B0GVM2 712 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 A0A1B0GVT2 93 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 TCAF2A6NFQ2 919 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 FAM47DPA6NHR8 397 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 GOLGA6L19H0YKK7 550 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 MID1O15344 667 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 DAB1O75553 588 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 CER1O95813 267 aa16.94■□□□□ 0.3
LINC00628-201ENST00000628516 MZF1P28698 734 aaPredicted RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms