RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 ATG4AQ8WYN0 398 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 TMBIM4Q9HC24 238 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 SH3BP4Q9P0V3 963 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 GPN3Q9UHW5 284 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 CHD2O14647 1828 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 ZNF541Q9H0D2 1346 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 A0A087X0T9 212 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 ZBTB39O15060 712 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 ONECUT3O60422 494 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 DGKIO75912 1065 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 GSTM1P09488 218 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 SPATA31D3P0C874 917 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 FAM228BP0C875 321 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 TCN1P20061 433 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 TARBP2Q15633 366 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 CDKAL1Q5VV42 579 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 SPATA31D4Q6ZUB0 917 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC24A5Q71RS6 500 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 PACS2Q86VP3 889 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 DTX3LQ8TDB6 740 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 PIK3R5Q8WYR1 880 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 PAWRQ96IZ0 340 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 RHBGQ9H310 441 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 FANCEQ9HB96 536 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 DUSP11O75319 330 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 TLX1P31314 330 aaPredicted RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 SMARCB1Q12824 385 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 CSTF3Q12996 717 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 FIGNQ5HY92 759 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 GPR158Q5T848 1215 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 MDM1Q8TC05 714 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 MANSC1Q9H8J5 431 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 DEC1Q9P2X7 70 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 MTO1Q9Y2Z2 717 aaKnown RBP9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 V9GYQ6 96 aa9.99□□□□□ -0.81
CLTCL1-211ENST00000621271 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TOMM70O94826 608 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TRUB2O95900 331 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 EIF2S1P05198 315 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 AMPD1P23109 780 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 JAK1P23458 1154 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 NOS2P35228 1153 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 NR2C2P49116 596 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC29A2Q14542 456 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 PAGE2BQ5JRK9 111 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 KLHL35Q6PF15 583 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 C16orf87Q6PH81 154 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 CYP20A1Q6UW02 462 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 LRRC34Q8IZ02 419 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 STK40Q8N2I9 435 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 HTR3CQ8WXA8 447 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 WNT8BQ93098 351 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MRPL48Q96GC5 212 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 VAT1Q99536 393 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TMEM121Q9BTD3 319 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 DMGDHQ9UI17 866 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 CAPN6Q9Y6Q1 641 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MED1Q15648 1581 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 NFATC1O95644 943 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 GLRA2P23416 452 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 NR6A1Q15406 480 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 ZC3H12AQ5D1E8 599 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 VN1R5Q7Z5H4 357 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 LUZP2Q86TE4 346 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SLC22A9Q8IVM8 553 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MYLPFQ96A32 169 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 EME1Q96AY2 570 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MTMR9Q96QG7 549 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 CEP41Q9BYV8 373 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 PABPC3Q9H361 631 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SEMA6BQ9H3T3 888 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 EXOSC4Q9NPD3 245 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 NCKIPSDQ9NZQ3 722 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TBC1D14Q9P2M4 693 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 ENTPD4Q9Y227 616 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 H3BMM5 538 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MAP2K7O14733 419 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 PLEKP08567 350 aaPredicted RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TPH1P17752 444 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 RHBDL3P58872 404 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 RUNX1T1Q06455 604 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MGAT5Q09328 741 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TUSC3Q13454 348 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 TRIM69Q86WT6 500 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 SPATA20Q8TB22 786 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 USP7Q93009 1102 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 QRFPRQ96P65 431 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 MYOCQ99972 504 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 USE1Q9NZ43 259 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 DNPEPQ9ULA0 475 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 STARD13Q9Y3M8 1113 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 ANKDD1BA6NHY2 528 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 E5RJQ4 531 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 F8VP50 259 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 CLTBP09497 229 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 UQCRBP14927 111 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 NQO1P15559 274 aaKnown RBP9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 CNTFP26441 200 aa9.98□□□□□ -0.81
CLTCL1-211ENST00000621271 CCR4P51679 360 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms