RNA–Protein interactions for RNA: ENST00000621150.3

TNFAIP3-211, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-211ENST00000621150 NME3Q13232 169 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 XRCC4Q13426 336 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 DDR2Q16832 855 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 CFAP58Q5T655 872 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 RNASEH2BQ5TBB1 312 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 IZUMO3Q5VZ72 239 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 MSANTD2Q6P1R3 559 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 DENND4AQ7Z401 1863 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 RNF139Q8WU17 664 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 PGLYRP2Q96PD5 576 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 CITED4Q96RK1 184 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 SMOC2Q9H3U7 446 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 ABCC13Q9NSE7 274 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 DDIT4Q9NX09 232 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 OSER1Q9NX31 292 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 ARHGEF38Q9NXL2 777 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 MTRF1LQ9UGC7 380 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 NEU3Q9UQ49 428 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 ZNF318Q5VUA4 2279 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 MTCL1Q9Y4B5 1905 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 hCG_2014768A0A024R1R8 64 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM72CH0Y354 149 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 DCLK1O15075 740 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 ADAM12O43184 909 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 EPCAMP16422 314 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 AMPD1P23109 780 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 RPL22P35268 128 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 NR2C2P49116 596 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 VPS41P49754 854 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 PMS2P54278 862 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 CBLBQ13191 982 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 SLMAPQ14BN4 828 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 PAFAH1B3Q15102 231 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 P3H1Q32P28 736 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 USP41Q3LFD5 358 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 UBAP2Q5T6F2 1119 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM72AQ5TYM5 149 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 SDHAF4Q5VUM1 108 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM72DQ6L9T8 149 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 PRSS55Q6UWB4 352 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 GSTA5Q7RTV2 222 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 MON1AQ86VX9 555 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 JAZF1Q86VZ6 243 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM72BQ86X60 149 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 SCN4BQ8IWT1 228 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 SLC22A17Q8WUG5 538 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 EDAQ92838 391 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 CEP295NLQ96MC4 621 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 FOXP3Q9BZS1 431 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 PABPC3Q9H361 631 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 COMMD8Q9NX08 183 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 DTLQ9NZJ0 730 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 STK39Q9UEW8 545 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 PLAAQ9Y263 795 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 ATP8A1Q9Y2Q0 1164 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 MFHAS1Q9Y4C4 1052 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 MUC6Q6W4X9 2439 aa12.8□□□□□ -0.36
TNFAIP3-211ENST00000621150 WDR27A2RRH5 827 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 SGK1O00141 431 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 SOD2P04179 222 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 ZDHHC11BP0C7U3 371 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 HOXB3P14651 431 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 ARL4AP40617 200 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 ZNF135P52742 658 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 CBX1P83916 185 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 ROR1Q01973 937 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 GPS2Q13227 327 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 MORF4L2Q15014 288 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 EFHC2Q5JST6 749 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 CES5AQ6NT32 575 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 C1orf228Q6PIY5 440 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 RFX8Q6ZV50 586 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 ZCCHC9Q8N567 271 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 STKLD1Q8NE28 680 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 HERC2P3Q9BVR0 1158 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 TTLL2Q9BWV7 592 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 TSPYL1Q9H0U9 437 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 OSBPL2Q9H1P3 480 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 SEMA4AQ9H3S1 761 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 FBXO44Q9H4M3 255 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM204AQ9H8W3 233 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 ANAPC5Q9UJX4 755 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 TPX2Q9ULW0 747 aaKnown RBP12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 SHOC2Q9UQ13 582 aa12.79□□□□□ -0.36
TNFAIP3-211ENST00000621150 SYNJ2BP-COX16A0A087WUM0 186 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 A0A1W2PQH9 124 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 H3BRJ5 948 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 CNPP09543 421 aaKnown RBP12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 CPB1P15086 417 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 HOXC13P31276 330 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 PLA2G5P39877 138 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 NRLP54845 237 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 DSG1Q02413 1049 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 ZNF844Q08AG5 666 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 GPS1Q13098 491 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 BRMS1LQ5PSV4 323 aa12.78□□□□□ -0.36
TNFAIP3-211ENST00000621150 MANEALQ5VSG8 457 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms