RNA–Protein interactions for RNA: ENST00000618856.1

NEK3-209, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-209ENST00000618856 ATP11AP98196 1134 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 SEMA3BQ13214 749 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CAMK2GQ13555 558 aaPredicted RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 ZNF234Q14588 700 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 MBLAC2Q68D91 279 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 KIAA1211LQ6NV74 962 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 FAM131BQ86XD5 332 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 DNAAF5Q86Y56 855 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CHPFQ8IZ52 775 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 ARFGAP1Q8N6T3 406 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 TSTD1Q8NFU3 115 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 OR8K1Q8NGG5 319 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 OR52K2Q8NGK3 314 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 FAM172AQ8WUF8 416 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 CPLX3Q8WVH0 158 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 RNF34Q969K3 372 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 TRIM11Q96F44 468 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 HHIPQ96QV1 700 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 SELENOOQ9BVL4 669 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 POLMQ9NP87 494 aaPredicted RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 ABHD10Q9NUJ1 306 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 SEPT11Q9NVA2 429 aaKnown RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 COX16Q9P0S2 106 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 VANGL2Q9ULK5 521 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 DNAH14Q0VDD8 3507 aa8.51□□□□□ -1.05
NEK3-209ENST00000618856 RIF1Q5UIP0 2472 aaKnown RBP8.51□□□□□ -1.05
NEK3-209ENST00000618856 MYO18AQ92614 2054 aaKnown RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 ATG2BQ96BY7 2078 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 DMXL1Q9Y485 3027 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 TMCO5BA8MYB1 307 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 C10orf142B7Z368 130 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 E9PAM4 449 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CNTN5O94779 1100 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 IGLV3-19P01714 112 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CYP1A2P05177 515 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 SRPRAP08240 638 aaKnown RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 TGM1P22735 817 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 PRKCHP24723 683 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 L1CAMP32004 1257 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 P2RY2P41231 377 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CSKP41240 450 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 PXNP49023 591 aaPredicted RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 COPAP53621 1224 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CDH18Q13634 790 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 SLC18A3Q16572 532 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 MAP7D1Q3KQU3 841 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 PLEKHG6Q3KR16 790 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 ALFQ53S48 1182 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 PITRM1Q5JRX3 1037 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 SDE2Q6IQ49 451 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 ZNF783Q6ZMS7 281 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CYP4V2Q6ZWL3 525 aaPredicted RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 SETD3Q86TU7 594 aaPredicted RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 NLRP14Q86W24 1093 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CIR1Q86X95 450 aaPredicted RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 APCDD1Q8J025 514 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CARNMT1Q8N4J0 409 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CCDC185Q8N715 623 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 NIPA2Q8N8Q9 360 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 UCMAQ8WVF2 138 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 SORCS1Q8WY21 1168 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 MRFAP1L1Q96HT8 127 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 LOXL4Q96JB6 756 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 RPRD1AQ96P16 312 aaPredicted RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 MCEEQ96PE7 176 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 FEM1AQ9BSK4 669 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 MAGEB5Q9BZ81 275 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 TRIM7Q9C029 511 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CACNA2D2Q9NY47 1150 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 STIM2Q9P246 746 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 CNOT8Q9UFF9 292 aaKnown RBP8.5□□□□□ -1.05
NEK3-209ENST00000618856 OR12D3Q9UGF7 316 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 SNX10Q9Y5X0 201 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 SCINQ9Y6U3 715 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 DOCK4Q8N1I0 1966 aa8.5□□□□□ -1.05
NEK3-209ENST00000618856 LAMA1P25391 3075 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 TCRBV21S2A2A0A5A6 115 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ANKRD62A6NC57 917 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 WASH4PA8MWX3 477 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 FAM72CH0Y354 149 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 H0Y626 953 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ATMINO43313 823 aaPredicted RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 GFRA3O60609 400 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 RPP40O75818 363 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 ALDH1A2O94788 518 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 LRIG2O94898 1065 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ATP5BP06576 529 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 POLR2EP19388 210 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 NDUFV2P19404 249 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 FECHP22830 423 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 MZF1P28698 734 aaPredicted RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 PCK1P35558 622 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 GGCXP38435 758 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 EIF4A3P38919 411 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 ZNF75DP51815 510 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 SRSF5Q13243 272 aaKnown RBP8.49□□□□□ -1.05
NEK3-209ENST00000618856 ACAP1Q15027 740 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 TCEAL1Q15170 157 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 CDO1Q16878 200 aa8.49□□□□□ -1.05
NEK3-209ENST00000618856 ARL13BQ3SXY8 428 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms