RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 ADGRF1Q5T601 910 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 FAM46CQ5VWP2 391 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 LVRNQ6Q4G3 990 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 SLC34A3Q8N130 599 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 NECAB1Q8N987 351 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 MAPK15Q8TD08 544 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 SAAL1Q96ER3 474 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 APOLD1Q96LR9 279 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 SPAG5Q96R06 1193 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 KCNK16Q96T55 309 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 CBWD1Q9BRT8 395 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 MED10Q9BTT4 135 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 DUSP16Q9BY84 665 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 NEUROG2Q9H2A3 272 aa4.76□□□□□ -1.65
SNCA-213ENST00000618500 MRPL44Q9H9J2 332 aaKnown RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 SMG1Q96Q15 3661 aaKnown RBP4.76□□□□□ -1.65
SNCA-213ENST00000618500 A6NNZ2 444 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CBX4O00257 560 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 AP1G1O43747 822 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KRT38O76015 456 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ABL1P00519 1130 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 C4BPAP04003 597 aaKnown RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 CSF2P04141 144 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MPOP05164 745 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KRT18P05783 430 aaKnown RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 DRD3P35462 400 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 UBA7P41226 1012 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ASPAP45381 313 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 PGFP49763 221 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 HNRNPKP61978 463 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNCA-213ENST00000618500 DAB2P98082 770 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 TLE1Q04724 770 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 EHHADHQ08426 723 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 BNIP3Q12983 259 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MAP7Q14244 749 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KCNJ12Q14500 433 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SGSM1Q2NKQ1 1148 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 C10orf120Q5SQS8 335 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 TMEM74Q96NL1 305 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SLC12A9Q9BXP2 914 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 HDAC8Q9BY41 377 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SDCBP2Q9H190 292 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 AASDHPPTQ9NRN7 309 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CCDC39Q9UFE4 941 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CHORDC1Q9UHD1 332 aaPredicted RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 ERVW-1Q9UQF0 538 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 PCDHGA4Q9Y5G9 962 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SLC12A8A0AV02 714 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 WNT9AO14904 365 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MID1O15344 667 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ATP9BO43861 1147 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SIN3BO75182 1162 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 PRKCGP05129 697 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 AKT2P31751 481 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ST8SIA6P61647 398 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 NR1D2Q14995 579 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SNRNP35Q16560 246 aaKnown RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 ZNF699Q32M78 642 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ZNF667Q5HYK9 610 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 AGBL4Q5VU57 503 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SCARA3Q6AZY7 606 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KIAA1161Q6NSJ0 714 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 BORAQ6PGQ7 559 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 GPRIN1Q7Z2K8 1008 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 BRAPQ7Z569 592 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 UNC45BQ8IWX7 931 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 ERCC4Q92889 916 aaPredicted RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 KLHDC7BQ96G42 594 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 STRADBQ9C0K7 418 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 TNMDQ9H2S6 317 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 SMYD3Q9H7B4 428 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KCNK4Q9NYG8 393 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MARCH2Q9P0N8 246 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 NAALADL1Q9UQQ1 740 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 PCDHGA3Q9Y5H0 932 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MYO18AQ92614 2054 aaKnown RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 SPTBN2O15020 2390 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MAST4O15021 2626 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KALRNO60229 2985 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 K7ESM1 405 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 IKBKBO14920 756 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 BEST1O76090 585 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 RECKO95980 971 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CST3P01034 146 aaPredicted RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 HNRNPA2B1P22626 353 aaKnown RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 CLDN6P56747 220 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 YWHAGP61981 247 aaKnown RBP eCLIP4.75□□□□□ -1.65
SNCA-213ENST00000618500 RAD51AP2Q09MP3 1159 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 MEA1Q16626 185 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 TMEM259Q4ZIN3 620 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 PIK3R6Q5UE93 754 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 KIAA1614Q5VZ46 1190 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 NUGGCQ68CJ6 796 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 GCNT7Q6ZNI0 430 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 USP53Q70EK8 1073 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 RSRC2Q7L4I2 434 aaKnown RBP4.75□□□□□ -1.65
SNCA-213ENST00000618500 FAM124AQ86V42 546 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 HOMEZQ8IX15 550 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 CCDC65Q8IXS2 484 aa4.75□□□□□ -1.65
SNCA-213ENST00000618500 GALNT11Q8NCW6 608 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms