RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 F2P00734 622 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 PIM1P11309 404 aaPredicted RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 MLNP12872 115 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 SLC6A3Q01959 620 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 MYBPC2Q14324 1141 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 PTPN21Q16825 1174 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 MMAAQ8IVH4 418 aaKnown RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 HCAR2Q8TDS4 363 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 KCNB2Q92953 911 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 PLD4Q96BZ4 506 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 SQORQ9Y6N5 450 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 FRMPD4Q14CM0 1322 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 GOLGA8TH3BQL2 631 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 ZBTB14O43829 449 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CCNDBP1O95273 360 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CER1O95813 267 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 ZNF211Q13398 564 aaPredicted RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CYP20A1Q6UW02 462 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 C4orf22Q6V702 233 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 WNT8BQ93098 351 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CNDP1Q96KN2 507 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.16□□□□□ -0.624e-18■□□□□ 8.2
POLR2A-209ENST00000617998 NRDE2Q9H7Z3 1164 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 RPRD1BQ9NQG5 326 aaKnown RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CATP04040 527 aaKnown RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 CXCR5P32302 372 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 ZNF135P52742 658 aaPredicted RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 KRT72Q14CN4 511 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 MORN1Q5T089 497 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 HSFY1Q96LI6 401 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 ARHGEF3Q9NR81 526 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 SHOC2Q9UQ13 582 aa11.16□□□□□ -0.62
POLR2A-209ENST00000617998 ZFP37Q9Y6Q3 630 aaPredicted RBP11.16□□□□□ -0.62
POLR2A-209ENST00000617998 DCXO43602 365 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 FDFT1P37268 417 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ALDH9A1P49189 494 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 FAM98AQ8NCA5 519 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 DPYSL5Q9BPU6 564 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 GOLPH3Q9H4A6 298 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 CHD2O14647 1828 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ALG11Q2TAA5 492 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 KHDRBS2Q5VWX1 349 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 OR6K2Q8NGY2 324 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 NAF1Q96HR8 494 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 TRIT1Q9H3H1 467 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ABCB8Q9NUT2 735 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 CDH7Q9ULB5 785 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 DRG1Q9Y295 367 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 C1orf232A0A0U1RR37 186 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ASGR2P07307 311 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 SLC5A3P53794 718 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ITGB3BPQ13352 177 aaPredicted RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 KLHL38Q2WGJ6 581 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 CCDC121Q6ZUS5 278 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 MRPL38Q96DV4 380 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 L3MBTL1Q9Y468 752 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ZSCAN9O15535 394 aaPredicted RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 TNFSF9P41273 254 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ALDH18A1P54886 795 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 PLA2G4EQ3MJ16 856 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 MYCBPAPQ8TBZ2 947 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 MAGED4Q96JG8 741 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 MCCC2Q9HCC0 563 aa11.15□□□□□ -0.62
POLR2A-209ENST00000617998 STX18Q9P2W9 335 aaKnown RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 ZNF142P52746 1687 aaPredicted RBP11.15□□□□□ -0.62
POLR2A-209ENST00000617998 A0A1W2PQ67 120 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 MDM4O15151 490 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 GUCY1B2O75343 617 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 VPS4BO75351 444 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 NCF2P19878 526 aaPredicted RBP11.15□□□□□ -0.63
POLR2A-209ENST00000617998 PTPN9P43378 593 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 PDIA2Q13087 525 aaKnown RBP11.15□□□□□ -0.63
POLR2A-209ENST00000617998 STAMBPL1Q96FJ0 436 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 JSRP1Q96MG2 331 aaPredicted RBP11.15□□□□□ -0.63
POLR2A-209ENST00000617998 OR12D3Q9UGF7 316 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 NALCNQ8IZF0 1738 aa11.15□□□□□ -0.63
POLR2A-209ENST00000617998 FTH1P02794 183 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 PLEKP08567 350 aaPredicted RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 IFT88Q13099 833 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ARID3BQ8IVW6 561 aaPredicted RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 LIX1Q8N485 282 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ANKRD52Q8NB46 1076 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ZNF669Q96BR6 464 aaPredicted RBP11.14□□□□□ -0.63
POLR2A-209ENST00000617998 FAM136AQ96C01 138 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 TEKT2Q9UIF3 430 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ATRNL1Q5VV63 1379 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 GALTP07902 379 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 SLC9A1P19634 815 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 KCNJ5P48544 419 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 CCR4P51679 360 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ART3Q13508 389 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 UGCGQ16739 394 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 MINDY4Q4G0A6 757 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 MAP3K21Q5TCX8 1036 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 EMC1Q8N766 993 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ZNF461Q8TAF7 563 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 FAM76AQ8TAV0 307 aa11.14□□□□□ -0.63
POLR2A-209ENST00000617998 ZNF507Q8TCN5 953 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms