RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 SEMA3BQ13214 749 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 SEMA5AQ13591 1074 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 SETDB1Q15047 1291 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 PAFAH1B3Q15102 231 aaKnown RBP15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 BTBD8Q5XKL5 378 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 LVRNQ6Q4G3 990 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 CCDC121Q6ZUS5 278 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 PIGWQ7Z7B1 504 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 MAB21L3Q8N8X9 362 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 USP33Q8TEY7 942 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 MZB1Q8WU39 189 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 ZNF296Q8WUU4 475 aaPredicted RBP15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 CASP10Q92851 521 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 NTAN1Q96AB6 310 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 SLCO1B3Q9NPD5 702 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 SLC17A7Q9P2U7 560 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 PCDHB8Q9UN66 801 aa15.99■□□□□ 0.15
SEMA3B-212ENST00000616701 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 HACD1B0YJ81 288 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 ARVCFO00192 962 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 ASMTLO95671 621 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 TAC1P20366 129 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 MGAT1P26572 445 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 CXCR3P49682 368 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 TCTN1Q2MV58 587 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 ATAD1Q8NBU5 361 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 DENND1AQ8TEH3 1009 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 UBP1Q9NZI7 540 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 A0A1W2PQH9 124 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 TYROBPO43914 113 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 MT-ND3P03897 115 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 F7P08709 466 aaPredicted RBP15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 ADRA1DP25100 572 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 NUMBP49757 651 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 IL9RQ01113 521 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 DSC1Q08554 894 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 TCP10LQ8TDR4 215 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 SLC44A1Q8WWI5 657 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 SLC9A7Q96T83 725 aa15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 IQCGQ9H095 443 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 NSRP1Q9H0G5 558 aaKnown RBP15.98■□□□□ 0.15
SEMA3B-212ENST00000616701 LAMA2P24043 3122 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 STK10O94804 968 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 EOMESO95936 686 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 CSH1P0DML2 217 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 CSH2P0DML3 217 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 TPSB2P20231 275 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 MAGEA6P43360 314 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 GPNMBQ14956 572 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 TPSAB1Q15661 275 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 FAM171A1Q5VUB5 890 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 ARHGAP36Q6ZRI8 547 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 SCD5Q86SK9 330 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 ABI1Q8IZP0 508 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 MCUQ8NE86 351 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 PXYLP1Q8TE99 480 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 SCLYQ96I15 445 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 MAGEB18Q96M61 343 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 APOL2Q9BQE5 337 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 DNAAF2Q9NVR5 837 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 OSER1Q9NX31 292 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 DNM1LO00429 736 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 C1QAP02745 245 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 TYMPP19971 482 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 PTPN3P26045 913 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 VEGFBP49765 207 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 SCAPQ12770 1279 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 VARS2Q5ST30 1063 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 CGB2Q6NT52 195 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 C4orf50Q6ZRC1 276 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 EBNA1BP2Q99848 306 aaKnown RBP15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 GGA2Q9UJY4 613 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 SLC27A5Q9Y2P5 690 aa15.97■□□□□ 0.15
SEMA3B-212ENST00000616701 TRIM49D1C9J1S8 452 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 PRPF4O43172 522 aaKnown RBP eCLIP15.96■□□□□ 0.159e-7■■■□□ 14.9
SEMA3B-212ENST00000616701 SNX3O60493 162 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 PQBP1O60828 265 aaKnown RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 APOEP02649 317 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 GLUD2P49448 558 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 USP46P62068 366 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 ZBTB17Q13105 803 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 SEPT7Q16181 437 aaKnown RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 PGAP3Q96FM1 320 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 GPR62Q9BZJ7 368 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 SQORQ9Y6N5 450 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 NLRC5Q86WI3 1866 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 DFFAO00273 331 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 TNFRSF10BO14763 440 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 ZBTB24O43167 697 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 F9P00740 461 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 SELPP16109 830 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 MAGEA3P43357 314 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 MAPRE1Q15691 268 aaKnown RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 UNC93B1Q9H1C4 597 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 ACTR5Q9H9F9 607 aaPredicted RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 BATF3Q9NR55 127 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 SMG5Q9UPR3 1016 aaKnown RBP15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 TRIM17Q9Y577 477 aa15.96■□□□□ 0.15
SEMA3B-212ENST00000616701 ENPP3O14638 875 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms