RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 AGAP9Q5VTM2 703 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 OLFML2BQ68BL8 750 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF470Q6ECI4 717 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 PCED1BQ96HM7 432 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 MECRQ9BV79 373 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 OSBPL1AQ9BXW6 950 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 MORF4L1Q9UBU8 362 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 TCRBV7S3A2A0A539 114 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 ERI2A8K979 691 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 PHGDHO43175 533 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 PQBP1O60828 265 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 SUPT7LO94864 414 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 ELF3P78545 371 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 KYAT3Q6YP21 454 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 TMEM110Q86TL2 294 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 HERPUD2Q9BSE4 406 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC4A5Q9BY07 1137 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 OSBPL7Q9BZF2 842 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 SYBUQ9NX95 663 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 CCNB1P14635 433 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 CYP3A5P20815 502 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 GRB14Q14449 540 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 DDR2Q16832 855 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 RNF43Q68DV7 783 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 MRNIPQ6NTE8 343 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 TBC1D13Q9NVG8 400 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 LSM7Q9UK45 103 aaKnown RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 TRIM13O60858 407 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 CNMDO75829 334 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 RHOBTB1O94844 696 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 OR4Q2P0C623 313 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 SP3Q02447 781 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 KLF1Q13351 362 aaPredicted RBP13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 RCN1Q15293 331 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 ADGRD1Q6QNK2 874 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 VSTM1Q6UX27 236 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZDHHC14Q8IZN3 488 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 TBL1YQ9BQ87 522 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 GPAMQ9HCL2 828 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 PGAP2Q9UHJ9 254 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC8A2Q9UPR5 921 aa13.48□□□□□ -0.25
PPP4R3B-206ENST00000616407 F8W8V4 182 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 H0Y626 953 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 SERPINB5P36952 375 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 CD151P48509 253 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 SCNN1BP51168 640 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 HDAC4P56524 1084 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 GAD2Q05329 585 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ELAVL2Q12926 359 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 GRIK3Q13003 919 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZRANB3Q5FWF4 1079 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 NOMO2Q5JPE7 1267 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 PDPK2PQ6A1A2 396 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 DPY19L2P1Q6NXN4 242 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ULK4Q96C45 1275 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZMAT2Q96NC0 199 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 IL22Q9GZX6 179 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 HMX1Q9NP08 348 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 TRPM5Q9NZQ8 1165 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 HACD3Q9P035 362 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 MARCH2Q9P0N8 246 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 STX7O15400 261 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 PRPF4O43172 522 aaKnown RBP eCLIP13.47□□□□□ -0.257e-7■□□□□ 11.2
PPP4R3B-206ENST00000616407 HOXA2O43364 376 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 TCN1P20061 433 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 CHRM3P20309 590 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 CYP2C18P33260 490 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ITGA7Q13683 1181 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 KCNA10Q16322 511 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ANKRD20A4Q4UJ75 823 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ZNF618Q5T7W0 954 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 DCLRE1AQ6PJP8 1040 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 EP400NLQ6ZTU2 488 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 R3HDMLQ9H3Y0 253 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 NMRK2Q9NPI5 230 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 IL1RAPL1Q9NZN1 696 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 ARL5CA6NH57 179 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 YJEFN3A6XGL0 299 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 E7ENQ6 273 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 UNC5CO95185 931 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 MPOP05164 745 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 CDH5P33151 784 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 OXCT1P55809 520 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 SEL1L3Q68CR1 1132 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 NAT8LQ8N9F0 302 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 PIP4K2CQ8TBX8 421 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 GPR152Q8TDT2 470 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 SLC35F5Q8WV83 523 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 FCRL2Q96LA5 508 aaPredicted RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 FAM8A1Q9UBU6 413 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 AFF4Q9UHB7 1163 aaKnown RBP13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 TAGLN3Q9UI15 199 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 NENFQ9UMX5 172 aa13.47□□□□□ -0.25
PPP4R3B-206ENST00000616407 SUPT3HB4E1H0 165 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 CBX4O00257 560 aa13.46□□□□□ -0.25
PPP4R3B-206ENST00000616407 NVLO15381 856 aaKnown RBP13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms