RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 ARHGEF4Q9NR80 690 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 TMEM248Q9NWD8 314 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 NEU3Q9UQ49 428 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 SAR1BQ9Y6B6 198 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 COL6A3P12111 3177 aa15.13■□□□□ 0.01
CD48-203ENST00000613788 hCG_1818297A0A087WSY0 165 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 H0Y626 953 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 ARNTLO00327 626 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CES2O00748 559 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CNTN5O94779 1100 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 TJP3O95049 919 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 LUC7L3O95232 432 aaKnown RBP15.12■□□□□ 0.01
CD48-203ENST00000613788 HOXD9P28356 352 aaPredicted RBP15.12■□□□□ 0.01
CD48-203ENST00000613788 OR1E1P30953 314 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CXCR5P32302 372 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 MAPKAPK2P49137 400 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 OXCT1P55809 520 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 PFKPQ01813 784 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 KAZNQ674X7 775 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 TMCO3Q6UWJ1 677 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 NLRP14Q86W24 1093 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CIR1Q86X95 450 aaPredicted RBP15.12■□□□□ 0.01
CD48-203ENST00000613788 MFN1Q8IWA4 741 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CARNMT1Q8N4J0 409 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 LZTR1Q8N653 840 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 RTL3Q8N8U3 475 aaKnown RBP15.12■□□□□ 0.01
CD48-203ENST00000613788 DNASE1L2Q92874 299 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 SLC2A11Q9BYW1 496 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 PLK2Q9NYY3 685 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 GTSE1Q9NYZ3 720 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 APOL1O14791 398 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 DCLK1O15075 740 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CEP104O60308 925 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 SRFP11831 508 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 KRT10P13645 584 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 SERPINB6P35237 376 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 IRAK1P51617 712 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 CDH18Q13634 790 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 C6orf118Q5T5N4 469 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 RNF43Q68DV7 783 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 TFAP2DQ7Z6R9 452 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 SETD3Q86TU7 594 aaPredicted RBP15.12■□□□□ 0.01
CD48-203ENST00000613788 FIBINQ8TAL6 211 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 ZNF592Q92610 1267 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 HEMGNQ9BXL5 484 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 TBC1D30Q9Y2I9 924 aa15.12■□□□□ 0.01
CD48-203ENST00000613788 OTOL1A6NHN0 477 aaPredicted RBP15.11■□□□□ 0.01
CD48-203ENST00000613788 CACNG3O60359 315 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 CST8O60676 142 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 LLGL1Q15334 1064 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 PREPLQ4J6C6 727 aaPredicted RBP15.11■□□□□ 0.01
CD48-203ENST00000613788 CCDC181Q5TID7 509 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 SLC9A4Q6AI14 798 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 AADACL2Q6P093 401 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 ANKS1BQ7Z6G8 1248 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 PQLC3Q8N755 202 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 KIF18AQ8NI77 898 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 MAIP1Q8WWC4 291 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 SLC2A4RGQ9NR83 387 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 ZNF212Q9UDV6 495 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 SORCS3Q9UPU3 1222 aa15.11■□□□□ 0.01
CD48-203ENST00000613788 FANCGO15287 622 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 RHOCP08134 193 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 GJA4P35212 333 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 NR2C2P49116 596 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 NDST2P52849 883 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 YBEYP58557 167 aaPredicted RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 SLC12A1Q13621 1099 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 PAFAH1B3Q15102 231 aaKnown RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 ZNF783Q6ZMS7 281 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 BBS12Q6ZW61 710 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 BZW1Q7L1Q6 419 aaKnown RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 SLC13A5Q86YT5 568 aaPredicted RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 UMODL1-AS1Q8N2C9 162 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 RASGEF1CQ8N431 466 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 NAT16Q8N8M0 369 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 TTC8Q8TAM2 541 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 EXOC4Q96A65 974 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 NAP1L3Q99457 506 aaPredicted RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 C8orf33Q9H7E9 229 aaPredicted RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 ETNK2Q9NVF9 386 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 KIAA1522Q9P206 1035 aaPredicted RBP15.1■□□□□ 0.01
CD48-203ENST00000613788 DEC1Q9P2X7 70 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 FBXO10Q9UK96 956 aa15.1■□□□□ 0.01
CD48-203ENST00000613788 ILVBLA1L0T0 632 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.09■□□□□ 0.01
CD48-203ENST00000613788 RAMP2O60895 175 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 GLULP15104 373 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 TGM2P21980 687 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 ETFBP38117 255 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 EIF2DP41214 584 aaKnown RBP15.09■□□□□ 0.01
CD48-203ENST00000613788 DYNLT1P63172 113 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 NCBP2-AS2Q69YL0 99 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 RNF135Q8IUD6 432 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 GJD3Q8N144 294 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 PLD5Q8N7P1 536 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 TTC13Q8NBP0 860 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 ACTRT1Q8TDG2 376 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 COG1Q8WTW3 980 aa15.09■□□□□ 0.01
CD48-203ENST00000613788 P3H4Q92791 437 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms