RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 WASHC5Q12768 1159 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 OLIG2Q13516 323 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 R3HDM1Q15032 1099 aaKnown RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM83EQ2M2I3 478 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 DCAF4L1Q3SXM0 396 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 TMEM63BQ5T3F8 832 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 CHSY1Q86X52 802 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 ERO1BQ86YB8 467 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 SKA2Q8WVK7 121 aaPredicted RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF333Q96JL9 665 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 MAGEB5Q9BZ81 275 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC167Q9P0B6 97 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 DCAF8L1A6NGE4 600 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 CAPN8A6NHC0 703 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 MFSD11O43934 449 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 TGDSO95455 350 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 T-ENOLP0DO92 83 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 COX4I1P13073 169 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 ERCC2P18074 760 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 CRHR1P34998 444 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 GABRB2P47870 512 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 KRT72Q14CN4 511 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 GRTP1Q5TC63 336 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 LBX2Q6XYB7 198 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 ARCQ7LC44 396 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 TREML1Q86YW5 311 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 NIPA2Q8N8Q9 360 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 URGCPQ8TCY9 931 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 JADE3Q92613 823 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 MFSD3Q96ES6 412 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 IFT43Q96FT9 208 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 C7orf26Q96N11 449 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 FAM193BQ96PV7 902 aaPredicted RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 CPNE1Q99829 537 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 MMADHCQ9H3L0 296 aaPredicted RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 NXF3Q9H4D5 531 aaKnown RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 COG4Q9H9E3 785 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 SPC25Q9HBM1 224 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 SSU72Q9NP77 194 aaKnown RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 DDX43Q9NXZ2 648 aaKnown RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 RPL26L1Q9UNX3 145 aaKnown RBP7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 TEX264Q9Y6I9 313 aa7.02□□□□□ -1.29
SYNPO2-206ENST00000610556 TAF1LQ8IZX4 1826 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CASTOR2A6NHX0 329 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 ANGPT2O15123 496 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 LY75O60449 1722 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 DDHD2O94830 711 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 EDN1P05305 212 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 DLDP09622 509 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CTBP1Q13363 440 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 WSCD1Q658N2 575 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 ZNF470Q6ECI4 717 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 SLC27A1Q6PCB7 646 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 RELL1Q8IUW5 271 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 KCTD4Q8WVF5 259 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 SNRNP27Q8WVK2 155 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 APBB2Q92870 758 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC138Q96M89 665 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 KCTD15Q96SI1 283 aaPredicted RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 ACE2Q9BYF1 805 aaPredicted RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 GRIP2Q9C0E4 1043 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 TMPRSS4Q9NRS4 437 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 RHBDL2Q9NX52 303 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 SUN2Q9UH99 717 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 SIX4Q9UIU6 781 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PPM1HQ9ULR3 514 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 MFHAS1Q9Y4C4 1052 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 FARP1Q9Y4F1 1045 aaPredicted RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 ATP6AP2A0A1C7CYW4 349 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 GOLGA8CPA6NN73 597 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PLIN3O60664 434 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 ATP6AP2O75787 350 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PIGRP01833 764 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 C2P06681 752 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 LYNP07948 512 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 GM2AP17900 193 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 NFKB1P19838 968 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CYP2B6P20813 491 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 MPSTP25325 297 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PEX2P28328 305 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 GRIA4P48058 902 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 TSPY1Q01534 308 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 MBTD1Q05BQ5 628 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CCDC153Q494R4 210 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CATSPER1Q8NEC5 780 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 BHLHE22Q8NFJ8 381 aaPredicted RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 CYGBQ8WWM9 190 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 SDCCAG3Q96C92 435 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 OPTNQ96CV9 577 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 RCN3Q96D15 328 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 MCRS1Q96EZ8 462 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PGLYRP2Q96PD5 576 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 MRPL46Q9H2W6 279 aaKnown RBP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PIF1Q9H611 641 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 POPDC2Q9HBU9 364 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 RBM22Q9NW64 420 aaKnown RBP eCLIP7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 ECM29Q5VYK3 1845 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 PPEF2O14830 753 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 MTSS1O43312 755 aa7.01□□□□□ -1.29
SYNPO2-206ENST00000610556 BNIP3LO60238 219 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms