RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 TLE2Q04725 743 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 GPR162Q16538 588 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 MAP3K21Q5TCX8 1036 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 KIAA1614Q5VZ46 1190 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 ANKRD44Q8N8A2 993 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 LINS1Q8NG48 757 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 PNISRQ8TF01 805 aaKnown RBP4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 ARHGAP39Q9C0H5 1083 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 GGA3Q9NZ52 723 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 FLRT1Q9NZU1 646 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 PI4KBQ9UBF8 816 aa4.77□□□□□ -1.65
SMCHD1-213ENST00000609587 SPATA31A5Q5VU36 1347 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 SPATA31A7Q8IWB4 1347 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 PRRT4C9JH25 899 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 CNTN5O94779 1100 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 LATS1O95835 1130 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 ENO1P06733 434 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 ALDOCP09972 364 aaKnown RBP4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 CYP2A6P11509 494 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 ACP5P13686 325 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 CPA1P15085 419 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 PNPLA4P41247 253 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 CDK18Q07002 472 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 DMWDQ09019 674 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 SLC10A2Q12908 348 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 TRPC3Q13507 836 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 DLGAP5Q15398 846 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 DHRS13Q6UX07 377 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 BBS12Q6ZW61 710 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 ADGRF3Q8IZF5 1079 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 USP38Q8NB14 1042 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 KCNJ9Q92806 393 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 REEP2Q9BRK0 252 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 HERC2P3Q9BVR0 1158 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 CLPBQ9H078 707 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 OSBPL5Q9H0X9 879 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 MTMR4Q9NYA4 1195 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 IFT80Q9P2H3 777 aaPredicted RBP4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 CRYL1Q9Y2S2 319 aa4.76□□□□□ -1.65
SMCHD1-213ENST00000609587 VWA3AA6NCI4 1184 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 TSPAN3O60637 253 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 RFPL3SP0C7P2 107 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 TNNT1P13805 278 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 XBP1P17861 261 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 TGM2P21980 687 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 TACR3P29371 465 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 IDUAP35475 653 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 B4GALNT1Q00973 533 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 CHRNDQ07001 517 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 ALKBH1Q13686 389 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 THOC5Q13769 683 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 ANXA2RQ3ZCQ2 193 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 CBWD5Q5RIA9 395 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 TFAP2DQ7Z6R9 452 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 RFX6Q8HWS3 928 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 RHPN2Q8IUC4 686 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 UEVLDQ8IX04 471 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 ENDOVQ8N8Q3 282 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 PPP1R10Q96QC0 940 aaKnown RBP4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 EFHD1Q9BUP0 239 aa4.75□□□□□ -1.65
SMCHD1-213ENST00000609587 EMSYQ7Z589 1322 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 A0A1B0GVC2 190 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 EYA2O00167 538 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 RRHO14718 337 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 KLK10O43240 276 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 HOXC11O43248 304 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 KCNAB3O43448 404 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SH3BP5O60239 455 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SGPL1O95470 568 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 CELA2AP08217 269 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 LYL1P12980 280 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 AKR1A1P14550 325 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 PRPH2P23942 346 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 CCR5P51681 352 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SRSF4Q08170 494 aaKnown RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 MTA1Q13330 715 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SEC23BQ15437 767 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 RUNDC3AQ59EK9 446 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 JAKMIP3Q5VZ66 844 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 ATG16L1Q676U5 607 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF425Q6IV72 752 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF782Q6ZMW2 699 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF813Q6ZN06 617 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 TMTC1Q8IUR5 882 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 IL17REQ8NFR9 667 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 OSR1Q8TAX0 266 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 ZNF398Q8TD17 642 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 PIGKQ92643 395 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 STAMQ92783 540 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 P2RY11Q96G91 374 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 C5orf34Q96MH7 638 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 FCRL5Q96RD9 977 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 GATA5Q9BWX5 397 aaPredicted RBP4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 TM2D2Q9BX73 214 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 HDHD5Q9BXW7 423 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 SEMA4CQ9C0C4 833 aa4.74□□□□□ -1.65
SMCHD1-213ENST00000609587 WASH6PQ9NQA3 447 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms