RNA–Protein interactions for RNA: ENST00000609232.5

CTCFL-222, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,668 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-222ENST00000609232 GRHL1Q9NZI5 618 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 CIDEBQ9UHD4 219 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 PCDHB7Q9Y5E2 793 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 ANK1P16157 1881 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 TRIM49D1C9J1S8 452 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 DGKIO75912 1065 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 UBOX5O94941 541 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 TRUB2O95900 331 aaKnown RBP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 SELPP16109 830 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 ATP2A2P16615 1042 aaKnown RBP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 PSMB4P28070 264 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 PPM1FP49593 454 aaPredicted RBP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 RPS6KA3P51812 740 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 NME5P56597 212 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 YWHAZP63104 245 aaKnown RBP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 KDSRQ06136 332 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 PTPRCAPQ14761 206 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 CCDC14Q49A88 953 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 LVRNQ6Q4G3 990 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 NAPRTQ6XQN6 538 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 TPGS1Q6ZTW0 290 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 CMC1Q7Z7K0 106 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 ZNF598Q86UK7 904 aaKnown RBP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 IGDCC3Q8IVU1 814 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 TMEM86AQ8N2M4 240 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 FNIP1Q8TF40 1166 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 SMIM14Q96QK8 99 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 FAM129AQ9BZQ8 928 aa10.09□□□□□ -0.79
CTCFL-222ENST00000609232 FAM124BQ9H5Z6 455 aaPredicted RBP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.09□□□□□ -0.79
CTCFL-222ENST00000609232 hCG_1818297A0A087WSY0 165 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 GOLGA8QA0A0J9YX86 632 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 GOLGA8OA6NCC3 632 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 GOLGA8NF8WBI6 632 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 TMEM63AO94886 807 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 CCND1P24385 295 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 MGAT1P26572 445 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 MSX2P35548 267 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 CHRNA4P43681 627 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 GABRB2P47870 512 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 SIX1Q15475 284 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 UPP1Q16831 310 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 C11orf91Q3C1V1 193 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 PPM1JQ5JR12 505 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 EFHC1Q5JVL4 640 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 OLFML1Q6UWY5 402 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 RPS27LQ71UM5 84 aaKnown RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 TMEM110Q86TL2 294 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 PRPF39Q86UA1 669 aaKnown RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 OR52K1Q8NGK4 314 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 ZNF669Q96BR6 464 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 CRTAC1Q9NQ79 661 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 hCG_2014768A0A024R1R8 64 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 C5orf60A6NFR6 353 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 GSTA1P08263 222 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 NCF2P19878 526 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 TPP2P29144 1249 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 CDKN2BP42772 138 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 LMNB2Q03252 620 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 FAAP100Q0VG06 881 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 MBTPS1Q14703 1052 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 PTPRRQ15256 657 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 DLG2Q15700 870 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 CTXN3Q4LDR2 81 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 HSP90AA5PQ58FG0 334 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 FAM35AQ86V20 835 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 EXOC3L1Q86VI1 746 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 HSFY1Q96LI6 401 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 CYTH2Q99418 400 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 HNRNPABQ99729 332 aaKnown RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 EBF2Q9HAK2 575 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 GKN1Q9NS71 199 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 UTP6Q9NYH9 597 aaKnown RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 NCF1BA6NI72 391 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 NCF1CA8MVU1 366 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 NCF1P14598 390 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 ITGB6P18564 788 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 PRMT2P55345 433 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 ARL4CP56559 192 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 YWHAHQ04917 246 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 ZNF460Q14592 562 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 EFHC2Q5JST6 749 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 ARHGAP36Q6ZRI8 547 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 TAOK1Q7L7X3 1001 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 MRPL10Q7Z7H8 261 aaKnown RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 LRRC6Q86X45 466 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 VPS52Q8N1B4 723 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 RNF148Q8N7C7 305 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 NIPA2Q8N8Q9 360 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 MYLPFQ96A32 169 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 RPRD1AQ96P16 312 aaPredicted RBP10.08□□□□□ -0.8
CTCFL-222ENST00000609232 OMDQ99983 421 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 SLC17A7Q9P2U7 560 aa10.08□□□□□ -0.8
CTCFL-222ENST00000609232 PRR23AA6NEV1 266 aa10.07□□□□□ -0.8
CTCFL-222ENST00000609232 XPO1O14980 1071 aaKnown RBP10.07□□□□□ -0.8
CTCFL-222ENST00000609232 LIASO43766 372 aa10.07□□□□□ -0.8
CTCFL-222ENST00000609232 SH3BGRLO75368 114 aa10.07□□□□□ -0.8
CTCFL-222ENST00000609232 ZMPSTE24O75844 475 aa10.07□□□□□ -0.8
CTCFL-222ENST00000609232 SUN1O94901 812 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms