RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 TNS1Q9HBL0 1735 aaKnown RBP22.89■■□□□ 1.26
SHANK2-220ENST00000608988 TRIM13O60858 407 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 GRAP2O75791 330 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 COL4A5P29400 1685 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 TCF7P36402 384 aaPredicted RBP22.89■■□□□ 1.25
SHANK2-220ENST00000608988 NUDT2P50583 147 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 LIMK2P53671 638 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 OSTNP61366 133 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 SLC9B1Q4ZJI4 515 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 DCAF15Q66K64 600 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 METTL7BQ6UX53 244 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 UNC5BQ8IZJ1 945 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 ZNF781Q8N8C0 355 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 COLGALT1Q8NBJ5 622 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 CSPG4P5Q96PW8 444 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 HAUS8Q9BT25 410 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 INO80BQ9C086 356 aaPredicted RBP22.89■■□□□ 1.25
SHANK2-220ENST00000608988 PRMT7Q9NVM4 692 aaPredicted RBP22.89■■□□□ 1.25
SHANK2-220ENST00000608988 GALNT8Q9NY28 637 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 DTLQ9NZJ0 730 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 HSFX1Q9UBD0 423 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 VTI1BQ9UEU0 232 aa22.89■■□□□ 1.25
SHANK2-220ENST00000608988 PRSS51A0A1B0GVH4 220 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 E9PBE3 544 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 KLHL41O60662 606 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 LGR5O75473 907 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 USP46P62068 366 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 RBP5P82980 135 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 CATSPERGQ6ZRH7 1159 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 CLEC14AQ86T13 490 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 NT5DC4Q86YG4 428 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 PSTKQ8IV42 348 aaKnown RBP22.88■■□□□ 1.25
SHANK2-220ENST00000608988 DSELQ8IZU8 1212 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 RNPEPQ9H4A4 650 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 DHX35Q9H5Z1 703 aaKnown RBP22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MRPL40Q9NQ50 206 aaKnown RBP22.88■■□□□ 1.25
SHANK2-220ENST00000608988 AP4E1Q9UPM8 1137 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 RAP2CQ9Y3L5 183 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 PSAT1Q9Y617 370 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 GOLGA8QA0A0J9YX86 632 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 GOLGA8OA6NCC3 632 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 GOLGA8NF8WBI6 632 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 G3V2L1 256 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MATN2O00339 956 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 BCAS2O75934 225 aaPredicted RBP22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MAP3K6O95382 1288 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 CYP2C8P10632 490 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 HADHAP40939 763 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MYBPC1Q00872 1141 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MBTD1Q05BQ5 628 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MYBPC3Q14896 1274 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 FAM187BQ17R55 369 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 NCBP2-AS2Q69YL0 99 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 NIM1KQ8IY84 436 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 METTL25Q8N6Q8 603 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 KBTBD7Q8WVZ9 684 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 SLC2A11Q9BYW1 496 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MRGBPQ9NV56 204 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 HOXC10Q9NYD6 342 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 GGA3Q9NZ52 723 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 HACD3Q9P035 362 aa22.88■■□□□ 1.25
SHANK2-220ENST00000608988 MGAMO43451 1857 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 INO80B-WBP1J3KQ70 363 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 HDAC3O15379 428 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 TADA2AO75478 443 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 CAPN15O75808 1086 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 STAG3L1P0CL83 205 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 EDNRBP24530 442 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 DNAJB1P25685 340 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 GLUD2P49448 558 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 POU5F1BQ06416 359 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 DPYSQ14117 519 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 PPM1JQ5JR12 505 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 PLPPR4Q7Z2D5 763 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 SNX32Q86XE0 403 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 DCLK2Q8N568 766 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 CNTD1Q8N815 330 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 TRPC4APQ8TEL6 797 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 KCTD15Q96SI1 283 aaPredicted RBP22.87■■□□□ 1.25
SHANK2-220ENST00000608988 ZNF385DQ9H6B1 395 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 PREBQ9HCU5 417 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 ZNF112Q9UJU3 913 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 ANKRD6Q9Y2G4 727 aa22.87■■□□□ 1.25
SHANK2-220ENST00000608988 ZMPSTE24O75844 475 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 ME2P23368 584 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 PPARGP37231 505 aaPredicted RBP22.86■■□□□ 1.25
SHANK2-220ENST00000608988 CSE1LP55060 971 aaKnown RBP22.86■■□□□ 1.25
SHANK2-220ENST00000608988 SESN2P58004 480 aaPredicted RBP22.86■■□□□ 1.25
SHANK2-220ENST00000608988 USP4Q13107 963 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 MYLK3Q32MK0 819 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 ZNF410Q86VK4 478 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 ZFP28Q8NHY6 868 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 SENP6Q9GZR1 1112 aaPredicted RBP22.86■■□□□ 1.25
SHANK2-220ENST00000608988 LRRC40Q9H9A6 602 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 PICK1Q9NRD5 415 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 IGSF9Q9P2J2 1179 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 SLC17A6Q9P2U8 582 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 AFG3L2Q9Y4W6 797 aa22.86■■□□□ 1.25
SHANK2-220ENST00000608988 ZBTB42B2RXF5 422 aa22.85■■□□□ 1.25
SHANK2-220ENST00000608988 AIM2O14862 343 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms