RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 ADPRHP54922 357 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 KCNMA1Q12791 1236 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 ZNF177Q13360 481 aaPredicted RBP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 MPPE1Q53F39 396 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 MANEAQ5SRI9 462 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 PERM1Q5SV97 790 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 MCTP1Q6DN14 999 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 IGF2-ASQ6U949 168 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 RBM44Q6ZP01 1051 aaKnown RBP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 SND1Q7KZF4 910 aaKnown RBP eCLIP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 ZFAND4Q86XD8 727 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 STK40Q8N2I9 435 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 PTCD2Q8WV60 388 aaKnown RBP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 NDRG1Q92597 394 aaKnown RBP9.65□□□□□ -0.86
CTCFL-220ENST00000608858 CALN1Q9BXU9 219 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 DCLK3Q9C098 648 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 FZD3Q9NPG1 666 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 SLCO3A1Q9UIG8 710 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 KIF3AQ9Y496 699 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 PCDHGA8Q9Y5G5 932 aa9.65□□□□□ -0.86
CTCFL-220ENST00000608858 POLQO75417 2590 aa9.65□□□□□ -0.87
CTCFL-220ENST00000608858 MUSKO15146 869 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 MTSS1O43312 755 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 PHACTR2O75167 634 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 PIAS2O75928 621 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 ALPPL2P10696 532 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 PRLRP16471 622 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 RIPPLY3P57055 190 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 CLDN2P57739 230 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 ST8SIA6P61647 398 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 ASIC1P78348 528 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 RFWD3Q6PCD5 774 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 KLHDC10Q6PID8 442 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 MMS22LQ6ZRQ5 1243 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 RSRC2Q7L4I2 434 aaKnown RBP9.64□□□□□ -0.87
CTCFL-220ENST00000608858 CLEC14AQ86T13 490 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 FBXO39Q8N4B4 442 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 KCTD17Q8N5Z5 321 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 FAM184AQ8NB25 1140 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 ZSCAN1Q8NBB4 408 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 RNF166Q96A37 237 aaPredicted RBP9.64□□□□□ -0.87
CTCFL-220ENST00000608858 MYO19Q96H55 970 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 TNIP3Q96KP6 325 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 NOX5Q96PH1 765 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 FBRSQ9HAH7 460 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 CSNK1G1Q9HCP0 422 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 KLHL11Q9NVR0 708 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 DNAJC28Q9NX36 388 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 MARCH2Q9P0N8 246 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 HMGXB4Q9UGU5 601 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 CYTH4Q9UIA0 394 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 SCML1Q9UN30 329 aa9.64□□□□□ -0.87
CTCFL-220ENST00000608858 CELSR2Q9HCU4 2923 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 RP1P56715 2156 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 C2CD3Q4AC94 2353 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 SCAMP1O15126 338 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 MAGEC1O60732 1142 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 TBL1XO60907 577 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 AGFG2O95081 481 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 GP1BAP07359 652 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 FAM163BP0C2L3 166 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 FAM200BP0CF97 657 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 IDEP14735 1019 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 VAV1P15498 845 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 UGT1A5P35504 534 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 CASRP41180 1078 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 NEK4P51957 841 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 NDST1P52848 882 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 MLLT10P55197 1068 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 DEFB133Q30KQ1 61 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 HNRNPA1L2Q32P51 320 aaKnown RBP9.63□□□□□ -0.87
CTCFL-220ENST00000608858 KMT5BQ4FZB7 885 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 CLEC20AQ6ZU45 233 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 KIAA0907Q7Z7F0 614 aaPredicted RBP9.63□□□□□ -0.87
CTCFL-220ENST00000608858 WDR49Q8IV35 697 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 AHI1Q8N157 1196 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 CPXM2Q8N436 756 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 OR13H1Q8NG92 308 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 WFIKKN2Q8TEU8 576 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 LARP4BQ92615 738 aaKnown RBP9.63□□□□□ -0.87
CTCFL-220ENST00000608858 HVCN1Q96D96 273 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 RPL10LQ96L21 214 aaKnown RBP9.63□□□□□ -0.87
CTCFL-220ENST00000608858 FOXP3Q9BZS1 431 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 EPB41L5Q9HCM4 733 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 NLGN3Q9NZ94 848 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 SFMBT1Q9UHJ3 866 aa9.63□□□□□ -0.87
CTCFL-220ENST00000608858 CSMD1Q96PZ7 3565 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 CCDC187A0A096LP49 1063 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 NEMP2A6NFY4 417 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 PRAMEF26H0Y7S4 382 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 LATO43561 262 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 ITGA2BP08514 1039 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 CSKP41240 450 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 CASP4P49662 377 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 KIF11P52732 1056 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 KCNAB2Q13303 367 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 SURF1Q15526 300 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 RAB11FIP2Q7L804 512 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 B3GNT8Q7Z7M8 397 aa9.62□□□□□ -0.87
CTCFL-220ENST00000608858 TADA2BQ86TJ2 420 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms