RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TEX35Q5T0J7 233 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 RWDD4Q6NW29 188 aaKnown RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 LRRC49Q8IUZ0 686 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 CDKL3Q8IVW4 592 aaPredicted RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 ARID3BQ8IVW6 561 aaPredicted RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 ARHGAP12Q8IWW6 846 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 ALLCQ8N6M5 410 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 SEC14L1Q92503 715 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 SUSD6Q92537 303 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 UBXN4Q92575 508 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 FGF13Q92913 245 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 HAUS1Q96CS2 278 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 HDAC11Q96DB2 347 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 ASB16Q96NS5 453 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 NECTIN4Q96NY8 510 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 RPRD1AQ96P16 312 aaPredicted RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 LRRC1Q9BTT6 524 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 CLDND1Q9NY35 253 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 MPP6Q9NZW5 540 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 TBC1D14Q9P2M4 693 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 SAE1Q9UBE0 346 aaPredicted RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 AMACRQ9UHK6 382 aa16.97■□□□□ 0.31
PMF1-206ENST00000606952 ZFP37Q9Y6Q3 630 aaPredicted RBP16.97■□□□□ 0.31
PMF1-206ENST00000606952 A0A1B0GVM2 712 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 TCAF2A6NFQ2 919 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 PPP1R12AO14974 1030 aaPredicted RBP16.96■□□□□ 0.31
PMF1-206ENST00000606952 CLDN11O75508 207 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 CNTN5O94779 1100 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 ECEL1O95672 775 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 MX2P20592 715 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 IGFBP4P22692 258 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 CHKAP35790 457 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 DR1Q01658 176 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 PDK1Q15118 436 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 PRKD1Q15139 912 aaPredicted RBP16.96■□□□□ 0.31
PMF1-206ENST00000606952 SLC45A4Q5BKX6 768 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 C1orf228Q6PIY5 440 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 JAMLQ86YT9 394 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 BBS7Q8IWZ6 715 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 CCDC105Q8IYK2 499 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 MICALL1Q8N3F8 863 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 GPR161Q8N6U8 529 aaKnown RBP16.96■□□□□ 0.31
PMF1-206ENST00000606952 HJURPQ8NCD3 748 aaPredicted RBP16.96■□□□□ 0.31
PMF1-206ENST00000606952 SMARCD2Q92925 531 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 FATE1Q969F0 183 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 E2F7Q96AV8 911 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 TSGA13Q96PP4 275 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 SMG9Q9H0W8 520 aaKnown RBP16.96■□□□□ 0.31
PMF1-206ENST00000606952 NOL6Q9H6R4 1146 aaKnown RBP16.96■□□□□ 0.31
PMF1-206ENST00000606952 CDH7Q9ULB5 785 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 HEY1Q9Y5J3 304 aa16.96■□□□□ 0.31
PMF1-206ENST00000606952 FCARP24071 287 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 STIP1P31948 543 aaKnown RBP16.95■□□□□ 0.3
PMF1-206ENST00000606952 KCNJ1P48048 391 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 YBEYP58557 167 aaPredicted RBP16.95■□□□□ 0.3
PMF1-206ENST00000606952 PPIDQ08752 370 aaKnown RBP16.95■□□□□ 0.3
PMF1-206ENST00000606952 SNX1Q13596 522 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 PTK6Q13882 451 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 CCDC70Q6NSX1 233 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 RFWD3Q6PCD5 774 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 ZNF783Q6ZMS7 281 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 Q7L0L9 218 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 FAM118BQ9BPY3 351 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 ANKZF1Q9H8Y5 726 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 USP29Q9HBJ7 922 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 NDFIP2Q9NV92 336 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 MARK1Q9P0L2 795 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 CDH22Q9UJ99 828 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 TBC1D30Q9Y2I9 924 aa16.95■□□□□ 0.3
PMF1-206ENST00000606952 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 SLC9A3R1O14745 358 aaPredicted RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 TTI1O43156 1089 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 GAS8O95995 478 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 GARSP41250 739 aaKnown RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 SGSHP51688 502 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 DRG2P55039 364 aaKnown RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 RPS24P62847 133 aaKnown RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 CBX2Q14781 532 aaPredicted RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 ERCC6LQ2NKX8 1250 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 PARP15Q460N3 678 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 MPPE1Q53F39 396 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 FAM78AQ5JUQ0 283 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 GET4Q7L5D6 327 aaPredicted RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 SETD3Q86TU7 594 aaPredicted RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 CCHCR1Q8TD31 782 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 TFB1MQ8WVM0 346 aaKnown RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 APOL5Q9BWW9 433 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 PCDH9Q9HC56 1237 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 DMGDHQ9UI17 866 aaKnown RBP16.94■□□□□ 0.3
PMF1-206ENST00000606952 CD207Q9UJ71 328 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 ZNF148Q9UQR1 794 aa16.94■□□□□ 0.3
PMF1-206ENST00000606952 TYW5A2RUC4 315 aaKnown RBP16.93■□□□□ 0.3
PMF1-206ENST00000606952 H7C0C1 242 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 MTSS1O43312 755 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 PENKP01210 267 aaPredicted RBP16.93■□□□□ 0.3
PMF1-206ENST00000606952 TUBBP07437 444 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 TNFRSF8P28908 595 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 ATP5OP48047 213 aa16.93■□□□□ 0.3
PMF1-206ENST00000606952 DUPD1Q68J44 220 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms