RNA–Protein interactions for RNA: ENST00000606273.3

HLA-F-230, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 579 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-230ENST00000606273 RAD54BQ9Y620 910 aa12.8□□□□□ -0.36
HLA-F-230ENST00000606273 KCNMB2Q9Y691 235 aa12.8□□□□□ -0.36
HLA-F-230ENST00000606273 TSC2P49815 1807 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 A0A1B0GVT2 93 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 ZNF840PA6NDX5 716 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 HCRTO43612 131 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 EPB41P11171 864 aaKnown RBP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 C6P13671 934 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 ACAT1P24752 427 aaKnown RBP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 IL12RB1P42701 662 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 CSNK1EP49674 416 aaKnown RBP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 CLDN6P56747 220 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 RBP5P82980 135 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 RHDQ02161 417 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 TARDBPQ13148 414 aaKnown RBP eCLIP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 CCDC142Q17RM4 750 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 KIF19Q2TAC6 998 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 ZACNQ401N2 412 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 BTBD8Q5XKL5 378 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 SASS6Q6UVJ0 657 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 SPATA2LQ8IUW3 424 aaPredicted RBP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 SPACA3Q8IXA5 215 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 PDCL2Q8N4E4 241 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 TERB1Q8NA31 727 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 SLC35C1Q96A29 364 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 TMEM176AQ96HP8 235 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 ARID3AQ99856 593 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 SAP130Q9H0E3 1048 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 XYLT2Q9H1B5 865 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 EIF2B4Q9UI10 523 aaKnown RBP12.79□□□□□ -0.36
HLA-F-230ENST00000606273 PCDHGA1Q9Y5H4 931 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 SNX11Q9Y5W9 270 aa12.79□□□□□ -0.36
HLA-F-230ENST00000606273 UNC79Q9P2D8 2635 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 DENND4CQ5VZ89 1909 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 SYCE3A1L190 88 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 J3QW42 95 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 KCNK3O14649 394 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 IKBKBO14920 756 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 HOXC11O43248 304 aaPredicted RBP12.78□□□□□ -0.36
HLA-F-230ENST00000606273 SLC28A2O43868 658 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 PCDHGA12O60330 932 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 KRT13P13646 458 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 ERCC5P28715 1186 aaPredicted RBP12.78□□□□□ -0.36
HLA-F-230ENST00000606273 HNF1BP35680 557 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 CSRP3P50461 194 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 CCDC173Q0VFZ6 552 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 BIRC3Q13489 604 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 LY6DQ14210 128 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 STX1AQ16623 288 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 OCLNQ16625 522 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 SV2CQ496J9 727 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 CBWD6Q4V339 395 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 HSP90AA4PQ58FG1 418 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 DCAF17Q5H9S7 520 aaPredicted RBP12.78□□□□□ -0.36
HLA-F-230ENST00000606273 CBWD3Q5JTY5 395 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 CBWD5Q5RIA9 395 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 LRRC52Q8N7C0 313 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 TAS1R2Q8TE23 839 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 WFDC12Q8WWY7 111 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 SEMA4DQ92854 862 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 FUBP3Q96I24 572 aaKnown RBP eCLIP12.78□□□□□ -0.36
HLA-F-230ENST00000606273 HPDLQ96IR7 371 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 SPATA17Q96L03 361 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 SAMSN1Q9NSI8 373 aaKnown RBP12.78□□□□□ -0.36
HLA-F-230ENST00000606273 NME7Q9Y5B8 376 aa12.78□□□□□ -0.36
HLA-F-230ENST00000606273 ATMQ13315 3056 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 E2F8A0AVK6 867 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 KCNJ18B7U540 433 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 WASH3PC4AMC7 463 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 MMP20O60882 483 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 DEAF1O75398 565 aaPredicted RBP12.77□□□□□ -0.37
HLA-F-230ENST00000606273 OAS1P00973 400 aaKnown RBP12.77□□□□□ -0.37
HLA-F-230ENST00000606273 HLA-DRAP01903 254 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 NTRK1P04629 796 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 MAGEA11P43364 429 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 PPP3CCP48454 512 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 SOWAHAQ2M3V2 549 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 CCDC40Q4G0X9 1142 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 COLEC12Q5KU26 742 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 SPOPLQ6IQ16 392 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 FAM171BQ6P995 826 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 KIAA1324Q6UXG2 1013 aaKnown RBP12.77□□□□□ -0.37
HLA-F-230ENST00000606273 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 OSTM1Q86WC4 334 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 TMEM25Q86YD3 366 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 TRIM59Q8IWR1 403 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 STK32AQ8WU08 396 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 OTUB2Q96DC9 234 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 USP36Q9P275 1121 aaKnown RBP12.77□□□□□ -0.37
HLA-F-230ENST00000606273 ARMCX3Q9UH62 379 aaPredicted RBP12.77□□□□□ -0.37
HLA-F-230ENST00000606273 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
HLA-F-230ENST00000606273 OBSL1O75147 1896 aa12.76□□□□□ -0.37
HLA-F-230ENST00000606273 CEP192Q8TEP8 1941 aa12.76□□□□□ -0.37
HLA-F-230ENST00000606273 PRRT4C9JH25 899 aa12.76□□□□□ -0.37
HLA-F-230ENST00000606273 PHACTR2O75167 634 aa12.76□□□□□ -0.37
HLA-F-230ENST00000606273 ABL1P00519 1130 aa12.76□□□□□ -0.37
HLA-F-230ENST00000606273 CDK4P11802 303 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms