RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 DIP2CQ9Y2E4 1556 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 H3BMM5 538 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 POU1F1P28069 291 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 RPL5P46777 297 aaKnown RBP21.48■■□□□ 1.03
SH3D19-211ENST00000604030 ALDH7A1P49419 539 aaKnown RBP21.48■■□□□ 1.03
SH3D19-211ENST00000604030 MIIPQ5JXC2 388 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 FOXR1Q6PIV2 292 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 FAM228AQ86W67 206 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 A0A0A0MRY4 1105 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 SYNCRIPO60506 623 aaKnown RBP21.48■■□□□ 1.03
SH3D19-211ENST00000604030 ATP4AP20648 1035 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 CYP2B6P20813 491 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 GTF2A2P52657 109 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 MIB1Q86YT6 1006 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 DPP10Q8N608 796 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 SPATA13Q96N96 652 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 XPNPEP3Q9NQH7 507 aa21.48■■□□□ 1.03
SH3D19-211ENST00000604030 SF3B1O75533 1304 aaKnown RBP eCLIP21.48■■□□□ 1.03
SH3D19-211ENST00000604030 TBKBP1A7MCY6 615 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 LBPP18428 481 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PDZK1Q5T2W1 519 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 WDR59Q6PJI9 974 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 TMC5Q6UXY8 1006 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 CDK20Q8IZL9 346 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 C8orf59Q8N0T1 100 aaPredicted RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 GLT1D1Q96MS3 346 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 SERHL2Q9H4I8 314 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 SERHLQ9NQF3 203 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 CNGB3Q9NQW8 809 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 POLLQ9UGP5 575 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PCDHA11Q9Y5I1 949 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 MEI4A8MW99 385 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 FAM86B1E9PN63 330 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PSMD12O00232 456 aaPredicted RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 FAM86B2P0C5J1 330 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 ATP6V1C1P21283 382 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 FKBP1AP62942 108 aaKnown RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PLIN5Q00G26 463 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 DDR1Q08345 913 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 SLC27A1Q6PCB7 646 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 FAM71AQ8IYT1 594 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 WDR60Q8WVS4 1066 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PRCCQ92733 491 aaPredicted RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 ARMCX1Q9P291 453 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 CYP3A7-CYP3A51PA0A087WV96 503 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 CYP3A7P24462 503 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 IFNGR2P38484 337 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PTCD3Q96EY7 689 aaKnown RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PRMT6Q96LA8 375 aaPredicted RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 RNF145Q96MT1 663 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PANX3Q96QZ0 392 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 LIMD1Q9UGP4 676 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 PRPF19Q9UMS4 504 aaKnown RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 ADGRB1O14514 1584 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 CLTCQ00610 1675 aaKnown RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 C2CD2LO14523 706 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 SMNDC1O75940 238 aaKnown RBP eCLIP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 ZBTB7AO95365 584 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 BNIP2Q12982 314 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 GJC2Q5T442 439 aaPredicted RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 C1orf186Q6ZWK4 172 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 MARK2Q7KZI7 788 aaKnown RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 POU5F2Q8N7G0 328 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 B3GALNT2Q8NCR0 500 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 RP9Q8TA86 221 aaKnown RBP21.47■■□□□ 1.03
SH3D19-211ENST00000604030 TBC1D10AQ9BXI6 508 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 MIEF1Q9NQG6 463 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 KANSL3Q9P2N6 904 aa21.47■■□□□ 1.03
SH3D19-211ENST00000604030 KLRC4O43908 158 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PIGNO95427 931 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 CBWD6Q4V339 395 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 CBWD3Q5JTY5 395 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 CBWD5Q5RIA9 395 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 DHDDSQ86SQ9 333 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PHF21BQ96EK2 531 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 KCNMB3Q9NPA1 279 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 VPS28Q9UK41 221 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 CORO1CQ9ULV4 474 aaPredicted RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ADGRB2O60241 1585 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 A0A087WZ62 844 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 FGF10O15520 208 aaPredicted RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 BMP10O95393 424 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 RPS7P62081 194 aaKnown RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 EFEMP1Q12805 493 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PCID2Q5JVF3 399 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 LRRC49Q8IUZ0 686 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PSTKQ8IV42 348 aaKnown RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 METTL6Q8TCB7 284 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 FDXACB1Q9BRP7 624 aaPredicted RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 C8orf4Q9NR00 106 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 MBL2P11226 248 aaPredicted RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 AMPD2Q01433 879 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ROR2Q01974 943 aaKnown RBP21.46■■□□□ 1.03
SH3D19-211ENST00000604030 CTXN3Q4LDR2 81 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ARMC3Q5W041 872 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 BAP1Q92560 729 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 TMEM169Q96HH4 297 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 POMKQ9H5K3 350 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 ARHGAP28Q9P2N2 729 aa21.46■■□□□ 1.03
SH3D19-211ENST00000604030 PNMA8BQ9ULN7 279 aaPredicted RBP21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms