RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 KLHL7Q8IXQ5 586 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 UTP15Q8TED0 518 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 HDAC2Q92769 488 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 FBXL8Q96CD0 374 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 DCUN1D1Q96GG9 259 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 NGLY1Q96IV0 654 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 MS4A14Q96JA4 679 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TMEM246Q9BRR3 403 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PACSIN1Q9BY11 444 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 POLR3BQ9NW08 1133 aaPredicted RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 AP4B1Q9Y6B7 739 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 DUSP10Q9Y6W6 482 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 LMO7Q8WWI1 1683 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 FAM187AA6NFU0 413 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 H3BMQ9 156 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 I3L4J1 428 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 RFPL2O75678 378 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 H6PDO95479 791 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PDGFRAP16234 1089 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CCNA2P20248 432 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CTNNA2P26232 953 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PIK3R1P27986 724 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 CXCR5P32302 372 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 MTIF2P46199 727 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ARFIP1P53367 373 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 RPL10AP62906 217 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 RNF4P78317 190 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TXNL4AP83876 142 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 NR5A1Q13285 461 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 KCNAB1Q14722 419 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 FASTKD3Q14CZ7 662 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 GRIK4Q16099 956 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 GEN1Q17RS7 908 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 AASDHQ4L235 1098 aaPredicted RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 GNASQ5JWF2 1037 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 KANK2Q63ZY3 851 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 SLC6A19Q695T7 634 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 SWSAP1Q6NVH7 229 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 XKR5Q6UX68 686 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 KRT74Q7RTS7 529 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ASPGQ86U10 573 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 MB21D1Q8N884 522 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 LEMD2Q8NC56 503 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TANKQ92844 425 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TNFRSF25Q93038 417 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PHF21AQ96BD5 680 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TESCQ96BS2 214 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ALKBH8Q96BT7 664 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TRMT2BQ96GJ1 504 aaKnown RBP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 HES6Q96HZ4 224 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PSMB7Q99436 277 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 RIT2Q99578 217 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 APBA2Q99767 749 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 GDF15Q99988 308 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 C7orf25Q9BPX7 421 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ZDHHC18Q9NUE0 388 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ACOXLQ9NUZ1 547 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 B3GNT2Q9NY97 397 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 PARP2Q9UGN5 583 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 EBF1Q9UH73 591 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 TRPS1Q9UHF7 1281 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 ERVK-19Q9WJR5 959 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 IPPQ9Y573 584 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 DMRT1Q9Y5R6 373 aa9.06□□□□□ -0.96
COMMD3-215ENST00000602574 A0A1W2PRG6 482 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PCDH17O14917 1159 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 POLR2DO15514 142 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ZBTB24O43167 697 aaPredicted RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 DAPK3O43293 454 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 KCNQ3O43525 872 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 DTNBO60941 627 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 SEMA3DO95025 777 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PDGFAP04085 211 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 WEE2P0C1S8 567 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 CKBP12277 381 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 LEPRP48357 1165 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 CLCNKBP51801 687 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 JAM2P57087 298 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 UBE2IP63279 158 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PPARDQ03181 441 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PON2Q15165 354 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 SKIV2LQ15477 1246 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 CCDC137Q6PK04 289 aaKnown RBP9.05□□□□□ -0.96
COMMD3-215ENST00000602574 NSMFQ6X4W1 530 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 CATSPERGQ6ZRH7 1159 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 LYSMD3Q7Z3D4 306 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 AMIGO2Q86SJ2 522 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PROM2Q8N271 834 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ADCY4Q8NFM4 1077 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 UFD1Q92890 307 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 PTP4A1Q93096 173 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 RNF34Q969K3 372 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ZDHHC12Q96GR4 267 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 C12orf57Q99622 126 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 MLXIPQ9HAP2 919 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 MCCC2Q9HCC0 563 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 ARL8BQ9NVJ2 186 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 VPS54Q9P1Q0 977 aa9.05□□□□□ -0.96
COMMD3-215ENST00000602574 LGALS13Q9UHV8 139 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms