RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 SRPRAP08240 638 aaKnown RBP17.73■□□□□ 0.43
HERC3-214ENST00000601319 HOXD12P35452 270 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 PTPN9P43378 593 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 PLK1P53350 603 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 CREB5Q02930 508 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 NR1I3Q14994 352 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 PLEKHG6Q3KR16 790 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 CXorf57Q6NSI4 855 aaKnown RBP17.73■□□□□ 0.43
HERC3-214ENST00000601319 PPP1R2P3Q6NXS1 205 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 KIAA1324Q6UXG2 1013 aaKnown RBP17.73■□□□□ 0.43
HERC3-214ENST00000601319 CYP2U1Q7Z449 544 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 IRF2BP2Q7Z5L9 587 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 ZNF683Q8IZ20 524 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 FRMD1Q8N878 549 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 C3orf20Q8ND61 904 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 OR2T3Q8NH03 318 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 NETO1Q8TDF5 533 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 IGSF8Q969P0 613 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 MRGPRX3Q96LB0 322 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 C1orf74Q96LT6 269 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 NAP1L5Q96NT1 182 aaPredicted RBP17.73■□□□□ 0.43
HERC3-214ENST00000601319 SLC6A17Q9H1V8 727 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 ANLNQ9NQW6 1124 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 ADAM22Q9P0K1 906 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 VANGL2Q9ULK5 521 aa17.73■□□□□ 0.43
HERC3-214ENST00000601319 PCDH15Q96QU1 1955 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 FAM170AA1A519 330 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 C2CD4BA6NLJ0 364 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 LRRC53A6NM62 1247 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 CLDN11O75508 207 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 DHPSP49366 369 aaPredicted RBP17.72■□□□□ 0.43
HERC3-214ENST00000601319 ST8SIA6P61647 398 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 RPL6Q02878 288 aaKnown RBP17.72■□□□□ 0.43
HERC3-214ENST00000601319 PEAR1Q5VY43 1037 aaPredicted RBP17.72■□□□□ 0.43
HERC3-214ENST00000601319 STRADAQ7RTN6 431 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 CIR1Q86X95 450 aaPredicted RBP17.72■□□□□ 0.43
HERC3-214ENST00000601319 TMPRSS6Q8IU80 811 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 EMC1Q8N766 993 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 PRCCQ92733 491 aaPredicted RBP17.72■□□□□ 0.43
HERC3-214ENST00000601319 HAPLN3Q96S86 360 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 ITM2CQ9NQX7 267 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 AIPL1Q9NZN9 384 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 CDV3Q9UKY7 258 aaKnown RBP17.72■□□□□ 0.43
HERC3-214ENST00000601319 CYP8B1Q9UNU6 501 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 TBC1D30Q9Y2I9 924 aa17.72■□□□□ 0.43
HERC3-214ENST00000601319 IGLV3-10A0A075B6K4 115 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 TCRBV5S1A1TA0A578 114 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 HLA-EP13747 358 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 SDC4P31431 198 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 PRKCIP41743 596 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 PTGER3P43115 390 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 VASPP50552 380 aaPredicted RBP17.71■□□□□ 0.43
HERC3-214ENST00000601319 IRAK1P51617 712 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 LIMK1P53667 647 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 CDH4P55283 916 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 ECT2LQ008S8 904 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 ZBTB16Q05516 673 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 SULT2A1Q06520 285 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 PUM1Q14671 1186 aaKnown RBP eCLIP17.71■□□□□ 0.43
HERC3-214ENST00000601319 RSPO4Q2I0M5 234 aaPredicted RBP17.71■□□□□ 0.43
HERC3-214ENST00000601319 HNRNPA1L2Q32P51 320 aaKnown RBP17.71■□□□□ 0.43
HERC3-214ENST00000601319 LYSMD4Q5XG99 296 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 TMEFF1Q8IYR6 380 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 C12orf50Q8NA57 414 aaPredicted RBP17.71■□□□□ 0.43
HERC3-214ENST00000601319 JOSD2Q8TAC2 188 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 ERLEC1Q96DZ1 483 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 SIPA1Q96FS4 1042 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 CD93Q9NPY3 652 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 PRSS16Q9NQE7 514 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 SEPT11Q9NVA2 429 aaKnown RBP17.71■□□□□ 0.43
HERC3-214ENST00000601319 SUN2Q9UH99 717 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 ERVW-1Q9UQF0 538 aa17.71■□□□□ 0.43
HERC3-214ENST00000601319 CACNA1EQ15878 2313 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 GOLGA6L19H0YKK7 550 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 KRT3P12035 628 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 PDGFRAP16234 1089 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 CD6P30203 668 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 OXTRP30559 389 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 GGCXP38435 758 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 PBX1P40424 430 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 TPMTP51580 245 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 ATXN1P54253 815 aaKnown RBP17.7■□□□□ 0.42
HERC3-214ENST00000601319 FANCCQ00597 558 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 SF3A2Q15428 464 aaKnown RBP17.7■□□□□ 0.42
HERC3-214ENST00000601319 CCDC6Q16204 474 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 ASIC2Q16515 512 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 CCDC14Q49A88 953 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 C14orf80Q86SX3 495 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 SYT12Q8IV01 421 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 APCDD1Q8J025 514 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 RXFP2Q8WXD0 754 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 CENPIQ92674 756 aaPredicted RBP17.7■□□□□ 0.42
HERC3-214ENST00000601319 ALG14Q96F25 216 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 SELENOOQ9BVL4 669 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 SIK2Q9H0K1 926 aa17.7■□□□□ 0.42
HERC3-214ENST00000601319 EVLQ9UI08 416 aaPredicted RBP17.7■□□□□ 0.42
HERC3-214ENST00000601319 TP53BP1Q12888 1972 aaPredicted RBP17.7■□□□□ 0.42
HERC3-214ENST00000601319 ADAMTS9Q9P2N4 1935 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms