RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 CBWD3Q5JTY5 395 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 CBWD5Q5RIA9 395 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 HES3Q5TGS1 186 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 PMF1Q6P1K2 205 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 LCLAT1Q6UWP7 414 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 ADAT2Q7Z6V5 191 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 MMAAQ8IVH4 418 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 UNC45BQ8IWX7 931 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 DHX40Q8IX18 779 aaKnown RBP6.34□□□□□ -1.39
VRK3-220ENST00000600259 APCDD1Q8J025 514 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 SLC25A45Q8N413 288 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 DCBLD1Q8N8Z6 715 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 MFSD2AQ8NA29 543 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 CLEC4CQ8WTT0 213 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 RNF139Q8WU17 664 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 FRS2Q8WU20 508 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 IRGQQ8WZA9 623 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 FGF11Q92914 225 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 SNX21Q969T3 373 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 NXPE2Q96DL1 559 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 PHF12Q96QT6 1004 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 CAAP1Q9H8G2 361 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 MMRN2Q9H8L6 949 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 LRRC4Q9HBW1 653 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 STIM2Q9P246 746 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 KIAA1257Q9ULG3 409 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 FZD4Q9ULV1 537 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 ERVW-1Q9UQF0 538 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 NCKAP1Q9Y2A7 1128 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 MYH10P35580 1976 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 TMEM131Q92545 1883 aa6.34□□□□□ -1.39
VRK3-220ENST00000600259 NAV2Q8IVL1 2488 aa6.34□□□□□ -1.4
VRK3-220ENST00000600259 SPTA1P02549 2419 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 LRRC72A6NJI9 287 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 EIF4E1BA6NMX2 242 aaKnown RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 TRIM38O00635 465 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 YKT6O15498 198 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 RNASEH2AO75792 299 aaKnown RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 CALCAP01258 141 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 LTFP02788 710 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 SRPRAP08240 638 aaKnown RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 SETSIPP0DME0 302 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 PYGBP11216 843 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 VAV1P15498 845 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 CKMT2P17540 419 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 C5AR1P21730 350 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 ACP1P24666 158 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 RGS7P49802 495 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 MXI1P50539 228 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 NDUFA8P51970 172 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 ADPRHP54922 357 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 TBX4P57082 545 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 PPP2CBP62714 309 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 PPP2CAP67775 309 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 INSM1Q01101 510 aaPredicted RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 ILKQ13418 452 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 CUL2Q13617 745 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 INAVAQ3KP66 663 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 DCAF6Q58WW2 860 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 MS4A13Q5J8X5 152 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 PITRM1Q5JRX3 1037 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 C6orf118Q5T5N4 469 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 NUGGCQ68CJ6 796 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 SND1Q7KZF4 910 aaKnown RBP eCLIP6.33□□□□□ -1.4
VRK3-220ENST00000600259 ERICH1Q86X53 443 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 SPACA3Q8IXA5 215 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 CFAP52Q8N1V2 620 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 STK40Q8N2I9 435 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 CCDC150Q8NCX0 1101 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 ENGASEQ8NFI3 743 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 LMO3Q8TAP4 145 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 GANCQ8TET4 914 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 ALG14Q96F25 216 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 HIC2Q96JB3 615 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 IPO9Q96P70 1041 aaKnown RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 DNAI2Q9GZS0 605 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 NUCKS1Q9H1E3 243 aaKnown RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 GDF3Q9NR23 364 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 CYTH4Q9UIA0 394 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 XPO7Q9UIA9 1087 aaKnown RBP6.33□□□□□ -1.4
VRK3-220ENST00000600259 SARDHQ9UL12 918 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 CFAP45Q9UL16 551 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 ZDHHC9Q9Y397 364 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 AK5Q9Y6K8 562 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 HECTD1Q9ULT8 2610 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 SHROOM3Q8TF72 1996 aa6.33□□□□□ -1.4
VRK3-220ENST00000600259 PIEZO2Q9H5I5 2752 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 EDDM13A0A1B0GTR0 161 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 TEX51A0A1B0GUA7 166 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 PIK3R2O00459 728 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 BRINP1O60477 761 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 RNASEH1O60930 286 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 LUC7L3O95232 432 aaKnown RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 IGLV3-25P01717 112 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 PAEPP09466 180 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 LCP1P13796 627 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 CD19P15391 556 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 ABCB4P21439 1286 aa6.32□□□□□ -1.4
VRK3-220ENST00000600259 MZF1P28698 734 aaPredicted RBP6.32□□□□□ -1.4
VRK3-220ENST00000600259 HNF1BP35680 557 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms