RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 ZNF143P52747 638 aaPredicted RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 CDH4P55283 916 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 HDAC4P56524 1084 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 MAMLD1Q13495 774 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 STARD3Q14849 445 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 PTPRNQ16849 979 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 ARL13BQ3SXY8 428 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 USP39Q53GS9 565 aaKnown RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 PITRM1Q5JRX3 1037 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 PLEKHA7Q6IQ23 1121 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 SARM1Q6SZW1 724 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 LRRC31Q6UY01 552 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 TTC17Q96AE7 1141 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 ZNF653Q96CK0 615 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 ISCUQ9H1K1 167 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 PARVAQ9NVD7 372 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 CNOT8Q9UFF9 292 aaKnown RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 INVSQ9Y283 1065 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 DMDP11532 3685 aa14.28□□□□□ -0.12
UPF1-205ENST00000598209 ZFHX2Q9C0A1 2572 aaPredicted RBP14.28□□□□□ -0.12
UPF1-205ENST00000598209 OTOGLQ3ZCN5 2332 aa14.27□□□□□ -0.12
UPF1-205ENST00000598209 NUP205Q92621 2012 aa14.27□□□□□ -0.12
UPF1-205ENST00000598209 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 DRGXA6NNA5 263 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 E9PAM4 449 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 DCLK1O15075 740 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 SYNCRIPO60506 623 aaKnown RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 CLDN11O75508 207 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 CNTN5O94779 1100 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 ASLP04424 464 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 EPHX1P07099 455 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 HLA-EP13747 358 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 NDUFV2P19404 249 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 HNRNPH3P31942 346 aaKnown RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 ADRA1BP35368 520 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 OXCT1P55809 520 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 OGDHQ02218 1023 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 ZNF177Q13360 481 aaPredicted RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 SLC12A1Q13621 1099 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 PLEKHG6Q3KR16 790 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 ALFQ53S48 1182 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 LAIR1Q6GTX8 287 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 KBTBD6Q86V97 674 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 APCDD1Q8J025 514 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 FAM160A2Q8N612 972 aaPredicted RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 CCDC185Q8N715 623 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 RLN3Q8WXF3 142 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 RUBCNQ92622 972 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 TRIM11Q96F44 468 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 HINFPQ9BQA5 517 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 CNPY3Q9BT09 278 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 RBSNQ9H1K0 784 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 TMEM245Q9H330 911 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 ARHGAP20Q9P2F6 1191 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 NCDNQ9UBB6 729 aa14.27□□□□□ -0.13
UPF1-205ENST00000598209 RIF1Q5UIP0 2472 aaKnown RBP14.27□□□□□ -0.13
UPF1-205ENST00000598209 CHD5Q8TDI0 1954 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 IGLV3-10A0A075B6K4 115 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 A0A087X0T9 212 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 AP5Z1O43299 807 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 SRGAP2O75044 1071 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 TPM1P09493 284 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 FAM228BP0C875 321 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 MYBL1P10243 752 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 DESP17661 470 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 MZF1P28698 734 aaPredicted RBP14.26□□□□□ -0.13
UPF1-205ENST00000598209 P2RY2P41231 377 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 CTSOP43234 321 aaPredicted RBP14.26□□□□□ -0.13
UPF1-205ENST00000598209 NUMBP49757 651 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 ARTNQ5T4W7 220 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 SCYL2Q6P3W7 929 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 TMC6Q7Z403 805 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 ZNF366Q8N895 744 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 OR8K1Q8NGG5 319 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 OR52K2Q8NGK3 314 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 NTAN1Q96AB6 310 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 SPACA7Q96KW9 195 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 MRGPRX1Q96LB2 322 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 DNAJC7Q99615 494 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 TRIM5Q9C035 493 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 OSBPL2Q9H1P3 480 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 SLC6A17Q9H1V8 727 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 MPP6Q9NZW5 540 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 MYO1AQ9UBC5 1043 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 GMEB2Q9UKD1 530 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 ERVW-1Q9UQF0 538 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 TBC1D30Q9Y2I9 924 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 SCINQ9Y6U3 715 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 GPR179Q6PRD1 2367 aa14.26□□□□□ -0.13
UPF1-205ENST00000598209 USP34Q70CQ2 3546 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 TMEM191CA6NGB0 347 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 RHOCP08134 193 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 BCKDHBP21953 392 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 PSMA2P25787 234 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 EIF4A3P38919 411 aaKnown RBP14.25□□□□□ -0.13
UPF1-205ENST00000598209 PLK1P53350 603 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 ST8SIA6P61647 398 aa14.25□□□□□ -0.13
UPF1-205ENST00000598209 ECT2LQ008S8 904 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms