RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 STAP1Q9ULZ2 295 aa18.51■□□□□ 0.55
CHMP2A-203ENST00000597209 LAMA1P25391 3075 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 SYNJ2BP-COX16A0A087WUM0 186 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 M0QYT0 321 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 F9P00740 461 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 MAOBP27338 520 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 VASPP50552 380 aaPredicted RBP18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 ECT2LQ008S8 904 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 SULT2A1Q06520 285 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 SFSWAPQ12872 951 aaKnown RBP18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 SEMA3BQ13214 749 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 NME3Q13232 169 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 TTC31Q49AM3 519 aaPredicted RBP18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 BRMS1LQ5PSV4 323 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 FKBP15Q5T1M5 1219 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 OTUD1Q5VV17 481 aaPredicted RBP18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 USP30Q70CQ3 517 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 PIP4P1Q86T03 277 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 NOP9Q86U38 636 aaKnown RBP18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 APCDD1Q8J025 514 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 HDDC3Q8N4P3 179 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 MSANTD4Q8NCY6 345 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 EPS8L1Q8TE68 723 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 BTBD1Q9H0C5 482 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 SGK2Q9HBY8 427 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 FSCN3Q9NQT6 498 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 FANCLQ9NW38 375 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 ARHGEF38Q9NXL2 777 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 COX16Q9P0S2 106 aa18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 CNOT1A5YKK6 2376 aaKnown RBP18.5■□□□□ 0.55
CHMP2A-203ENST00000597209 OPHN1O60890 802 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 RNASEH1O60930 286 aaKnown RBP18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 SIN3BO75182 1162 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 ACSL1P33121 698 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 CTSOP43234 321 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 CXCR3P49682 368 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 SHC2P98077 582 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 SLC14A1Q13336 389 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 AUHQ13825 339 aaKnown RBP18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 C9orf64Q5T6V5 341 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 ACBD5Q5T8D3 534 aaPredicted RBP18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 ARCQ7LC44 396 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 CACUL1Q86Y37 369 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 XYLT1Q86Y38 959 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 MINDY1Q8N5J2 469 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 C1orf216Q8TAB5 229 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 GTPBP2Q9BX10 602 aaKnown RBP18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 SLC32A1Q9H598 525 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 WDCPQ9H6R7 721 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 PIGVQ9NUD9 493 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 PAXBP1Q9Y5B6 917 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 HS3ST4Q9Y661 456 aa18.49■□□□□ 0.55
CHMP2A-203ENST00000597209 EDDM13A0A1B0GTR0 161 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 GIPC1O14908 333 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 PAGE1O75459 146 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 NNMTP40261 264 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 JAM2P57087 298 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 NOMO3P69849 1222 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 STX1AQ16623 288 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 SLC25A52Q3SY17 297 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 TAF3Q5VWG9 929 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 RNF219Q5W0B1 726 aaPredicted RBP18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 CXorf57Q6NSI4 855 aaKnown RBP18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 FAM124AQ86V42 546 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 IGSF8Q969P0 613 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 RPRD1AQ96P16 312 aaPredicted RBP18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 ADAM33Q9BZ11 813 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 PABPC3Q9H361 631 aaKnown RBP18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 MTG2Q9H4K7 406 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 OSGEPQ9NPF4 335 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 LIMA1Q9UHB6 759 aaKnown RBP18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 SLCO3A1Q9UIG8 710 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 NOCTQ9UK39 431 aaKnown RBP18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 ANGPTL2Q9UKU9 493 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 NCKAP1Q9Y2A7 1128 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 SIK3Q9Y2K2 1263 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 ADAMTS9Q9P2N4 1935 aa18.48■□□□□ 0.55
CHMP2A-203ENST00000597209 LRRC10BA6NIK2 292 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 TTC34A8MYJ7 566 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 BCAT2O15382 392 aaPredicted RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 CLDN11O75508 207 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 GJB3O75712 270 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 SEMA4FO95754 770 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 MBD3O95983 291 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 CYP1A1P04798 512 aaPredicted RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 MMEP08473 750 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 SOX5P35711 763 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 SULT1E1P49888 294 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 COPB1P53618 953 aaKnown RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 CDH4P55283 916 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 RNASE9P60153 205 aaKnown RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 POLR2FP61218 127 aaKnown RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 CDR2Q01850 454 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 MYL5Q02045 173 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 SND1Q7KZF4 910 aaKnown RBP eCLIP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 BNIPLQ7Z465 357 aa18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 CIR1Q86X95 450 aaPredicted RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 DHX40Q8IX18 779 aaKnown RBP18.47■□□□□ 0.55
CHMP2A-203ENST00000597209 ANKRD20A12PQ8NF67 263 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms