RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 DUSP6Q16828 381 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 P3H1Q32P28 736 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 FAM133BQ5BKY9 247 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 STXBP5Q5T5C0 1151 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 ALS2CLQ60I27 953 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 TMC3Q7Z5M5 1100 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 SHKBP1Q8TBC3 707 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 ADAMTS19Q8TE59 1207 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 TCEAL4Q96EI5 215 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 MYEOVQ96EZ4 313 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 CELF6Q96J87 481 aaKnown RBP15.61■□□□□ 0.09
VRK3-207ENST00000594092 ZYG11BQ9C0D3 744 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 NDFIP2Q9NV92 336 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 CPQQ9Y646 472 aa15.61■□□□□ 0.09
VRK3-207ENST00000594092 TNRC18O15417 2968 aaPredicted RBP15.6■□□□□ 0.09
VRK3-207ENST00000594092 DOCK4Q8N1I0 1966 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 NDC80O14777 642 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 NCAM2O15394 837 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 MOSPD3O75425 235 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 CNTN5O94779 1100 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 FGF19O95750 216 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 POU2F2P09086 479 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 RHOQP17081 205 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 SLC6A4P31645 630 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 ITGA8P53708 1063 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 SLC7A9P82251 487 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 ZXDBP98169 803 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 DHX9Q08211 1270 aaKnown RBP15.6■□□□□ 0.09
VRK3-207ENST00000594092 ALFQ53S48 1182 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 FAM182AQ5T1J6 154 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 CFAP58Q5T655 872 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 IZUMO3Q5VZ72 239 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 ARHGAP12Q8IWW6 846 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 LZTR1Q8N653 840 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 CCNYQ8ND76 341 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 ZNF707Q96C28 371 aaPredicted RBP15.6■□□□□ 0.09
VRK3-207ENST00000594092 TIFAQ96CG3 184 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 RPRD1AQ96P16 312 aaPredicted RBP15.6■□□□□ 0.09
VRK3-207ENST00000594092 RUFY1Q96T51 708 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 PRKD2Q9BZL6 878 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 ADAM7Q9H2U9 754 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 ANAPC5Q9UJX4 755 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 AGO1Q9UL18 857 aaKnown RBP15.6■□□□□ 0.09
VRK3-207ENST00000594092 NUP205Q92621 2012 aa15.6■□□□□ 0.09
VRK3-207ENST00000594092 TRAV19A0A0A6YYK7 116 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 CCDC195A0A1B0GUA6 201 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 F5H5T6 163 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 DNALI1O14645 258 aaPredicted RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 CKMP06732 381 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 PFKLP17858 780 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 MX2P20592 715 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 AP1B1Q10567 949 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 C5orf22Q49AR2 442 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 HSP90B2PQ58FF3 399 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 HEATR6Q6AI08 1181 aaKnown RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 RFWD3Q6PCD5 774 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 ELMSAN1Q6PJG2 1045 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 LGI2Q8N0V4 545 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 HTR3CQ8WXA8 447 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 SLC46A2Q9BY10 475 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 TSPYL1Q9H0U9 437 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 TMEM248Q9NWD8 314 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 NOTCH4Q99466 2003 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 GREM1O60565 184 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 PPFIA2O75334 1257 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 GARSP41250 739 aaKnown RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 FAM193AP78312 1265 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 NTHL1P78549 312 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 PPIDQ08752 370 aaKnown RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 KCNC3Q14003 757 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 SLMAPQ14BN4 828 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 SLC5A9Q2M3M2 681 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 SPDYCQ5MJ68 293 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 AFMIDQ63HM1 303 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 RHBDF2Q6PJF5 856 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 TFAP2DQ7Z6R9 452 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 CIR1Q86X95 450 aaPredicted RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 LEMD2Q8NC56 503 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 VN1R2Q8NFZ6 395 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 UBLCP1Q8WVY7 318 aaPredicted RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 HDAC11Q96DB2 347 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 MRPL38Q96DV4 380 aaKnown RBP15.59■□□□□ 0.09
VRK3-207ENST00000594092 P2RY11Q96G91 374 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 BRD8Q9H0E9 1235 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 ZNF212Q9UDV6 495 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 ATP8A1Q9Y2Q0 1164 aa15.59■□□□□ 0.09
VRK3-207ENST00000594092 C5orf60A6NFR6 353 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 GCATO75600 419 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 LATS1O95835 1130 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 DDX6P26196 483 aaKnown RBP eCLIP15.58■□□□□ 0.08
VRK3-207ENST00000594092 ACTN2P35609 894 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 HSD17B3P37058 310 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 TEAD2Q15562 447 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 PRSS36Q5K4E3 855 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 ADGRF1Q5T601 910 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 GPR158Q5T848 1215 aa15.58■□□□□ 0.08
VRK3-207ENST00000594092 RNASEH2BQ5TBB1 312 aaKnown RBP15.58■□□□□ 0.08
VRK3-207ENST00000594092 HIBCHQ6NVY1 386 aaPredicted RBP15.58■□□□□ 0.08
VRK3-207ENST00000594092 GRASPQ7Z6J2 395 aaPredicted RBP15.58■□□□□ 0.08
VRK3-207ENST00000594092 C12orf76Q8N812 135 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms