RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 SULF1Q8IWU6 871 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 HACE1Q8IYU2 909 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 ZNF567Q8N184 647 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 LRRC52Q8N7C0 313 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 PRDM12Q9H4Q4 367 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 PLEKHA5Q9HAU0 1116 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 CYP4F11Q9HBI6 524 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 COPG2Q9UBF2 871 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 RPS6KL1Q9Y6S9 549 aa16.91■□□□□ 0.3
LIG1-206ENST00000594067 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 SPTLC1O15269 473 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 OPHN1O60890 802 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 USP12O75317 370 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 PDE5AO76074 875 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 RALBP11234 206 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 NCF2P19878 526 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 MATKP42679 507 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 COPAP53621 1224 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 PEX6Q13608 980 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 CCNIQ14094 377 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 PDPK2PQ6A1A2 396 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 PGM2L1Q6PCE3 622 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 CATSPER4Q7RTX7 472 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 ST13P4Q8IZP2 240 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 PPTC7Q8NI37 304 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 RNF139Q8WU17 664 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 DCPSQ96C86 337 aaKnown RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 FCRL3Q96P31 734 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 AGAP3Q96P47 875 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 NXF3Q9H4D5 531 aaKnown RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 CDHR5Q9HBB8 845 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 DERAQ9Y315 318 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 PCNTO95613 3336 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 PABPC4LP0CB38 370 aaKnown RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 UQCRBP14927 111 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 TKTP29401 623 aaKnown RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 GRIA2P42262 883 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 ABCE1P61221 599 aaKnown RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 ADIGQ0VDE8 80 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 MED21Q13503 144 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 TTLL12Q14166 644 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 TNS4Q8IZW8 715 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 EFCAB3Q8N7B9 438 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 DRAXINQ8NBI3 349 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 EZH1Q92800 747 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 NDNQ99608 321 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 VCX3BQ9H321 246 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 VCX3AQ9NNX9 186 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 EIF2B3Q9NR50 452 aaKnown RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 KLK14Q9P0G3 267 aa16.9■□□□□ 0.3
LIG1-206ENST00000594067 RGS17Q9UGC6 210 aaPredicted RBP16.9■□□□□ 0.3
LIG1-206ENST00000594067 COL1A2P08123 1366 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 LOC100653049A0A140TA62 436 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 KCNK1O00180 336 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 KRT34O76011 436 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 ABCG1P45844 678 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 IFRD2Q12894 506 aaPredicted RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 PID1Q7Z2X4 250 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 ARHGAP22Q7Z5H3 698 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 PLD6Q8N2A8 252 aaKnown RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 OR52K1Q8NGK4 314 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 SLC26A7Q8TE54 656 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 CCDC124Q96CT7 223 aaKnown RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 CERS2Q96G23 380 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 OXCT2Q9BYC2 517 aaPredicted RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 UBE2OQ9C0C9 1292 aaKnown RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 SNX25Q9H3E2 840 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 STN1Q9H668 368 aaKnown RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 SNX15Q9NRS6 342 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 MAGED2Q9UNF1 606 aaPredicted RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 ZSWIM8A7E2V4 1837 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 ZNF195O14628 629 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 RECQL4O94761 1208 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 POLBP06746 335 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 GRK2P25098 689 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 SCNN1AP37088 669 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 GP5P40197 560 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 ACADSBP45954 432 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 AQP4P55087 323 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 GRM2Q14416 872 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 SLC25A52Q3SY17 297 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 FBXO47Q5MNV8 452 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 OTUD1Q5VV17 481 aaPredicted RBP16.89■□□□□ 0.29
LIG1-206ENST00000594067 SLC27A1Q6PCB7 646 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 PIGZQ86VD9 579 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 CRYBG2Q8N1P7 616 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 DCLK2Q8N568 766 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 KLHL4Q9C0H6 718 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 SETD4Q9NVD3 440 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 DNAJC28Q9NX36 388 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 COMMD3-BMI1R4GMX3 469 aa16.89■□□□□ 0.29
LIG1-206ENST00000594067 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 PLXNA1Q9UIW2 1896 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 ZMPSTE24O75844 475 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 DDNO94850 711 aaPredicted RBP16.88■□□□□ 0.29
LIG1-206ENST00000594067 ETS2P15036 469 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 CPA3P15088 417 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 VCLP18206 1134 aa16.88■□□□□ 0.29
LIG1-206ENST00000594067 RPL34P49207 117 aaKnown RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms