RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 SNX10Q9Y5X0 201 aa19.08■□□□□ 0.64
SHKBP1-202ENST00000593764 A0A1B0GVM2 712 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 TCAF2A6NFQ2 919 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 FOXD2O60548 495 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 GJB6O95452 261 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 FERP16591 822 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 MZF1P28698 734 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 CTSOP43234 321 aaPredicted RBP19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 NSFP46459 744 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 PLEKHG6Q3KR16 790 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 ZSCAN23Q3MJ62 389 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 RAB6CQ53S08 254 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 TCEAL6Q6IPX3 200 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 SLC36A4Q6YBV0 504 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 SND1Q7KZF4 910 aaKnown RBP eCLIP19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 OR52K2Q8NGK3 314 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 OR2T3Q8NH03 318 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 JOSD2Q8TAC2 188 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 TCEAL3Q969E4 200 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 SIPA1Q96FS4 1042 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 TTYH3Q9C0H2 523 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 RAB6CQ9H0N0 254 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 TMEM51Q9NW97 253 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 ADAM22Q9P0K1 906 aa19.07■□□□□ 0.64
SHKBP1-202ENST00000593764 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 C2CD4BA6NLJ0 364 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 SERPINC1P01008 464 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 ASLP04424 464 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 PLK1P53350 603 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 RPL6Q02878 288 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 CCDC14Q49A88 953 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 SH3PXD2AQ5TCZ1 1133 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 MON1BQ7L1V2 547 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 ARMCX6Q7L4S7 300 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 CYP2U1Q7Z449 544 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 DEFB119Q8N690 84 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 RXFP2Q8WXD0 754 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 ALG14Q96F25 216 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 C1orf74Q96LT6 269 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 MTG2Q9H4K7 406 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 TMEM74BQ9NUR3 256 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 ERVW-1Q9UQF0 538 aa19.06■□□□□ 0.64
SHKBP1-202ENST00000593764 TCRBV5S1A1TA0A578 114 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 LRRC53A6NM62 1247 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 AP5Z1O43299 807 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 CNTN5O94779 1100 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 IGLV3-19P01714 112 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 CCDC172P0C7W6 258 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 PDGFRAP16234 1089 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 RDXP35241 583 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 TPMTP51580 245 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 ATP11AP98196 1134 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 FANCCQ00597 558 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 ECT2LQ008S8 904 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 SLC12A1Q13621 1099 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 PUM1Q14671 1186 aaKnown RBP eCLIP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 ARID5BQ14865 1188 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 C15orf59Q2T9L4 293 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 E4F1Q66K89 784 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 FAM131BQ86XD5 332 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 SLC41A1Q8IVJ1 513 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 KDM1BQ8NB78 822 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 PIGKQ92643 395 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 PRCCQ92733 491 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 HAPLN3Q96S86 360 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 SEPT11Q9NVA2 429 aaKnown RBP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 WSB2Q9NYS7 404 aaPredicted RBP19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 AIPL1Q9NZN9 384 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 SUN2Q9UH99 717 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 SLCO3A1Q9UIG8 710 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 TBC1D30Q9Y2I9 924 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 PAXBP1Q9Y5B6 917 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 OR51B4Q9Y5P0 310 aa19.05■□□□□ 0.64
SHKBP1-202ENST00000593764 TNRC6BQ9UPQ9 1833 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CEP192Q8TEP8 1941 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CACNA1AO00555 2505 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 DRGXA6NNA5 263 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 PATE3B3GLJ2 98 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CLDN11O75508 207 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 MOCS3O95396 460 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CALB1P05937 261 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 SRPRAP08240 638 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 KRT3P12035 628 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 ITPKAP23677 461 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CD6P30203 668 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 RFC1P35251 1148 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 PBX1P40424 430 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 NUMBP49757 651 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 C1QBPQ07021 282 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 SKOR2Q2VWA4 1001 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 HNRNPA1L2Q32P51 320 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 ALFQ53S48 1182 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 ACAD10Q6JQN1 1059 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 C12orf50Q8NA57 414 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 C3orf20Q8ND61 904 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 NETO1Q8TDF5 533 aa19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 CENPIQ92674 756 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 TOE1Q96GM8 510 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 ZNF419Q96HQ0 510 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-202ENST00000593764 RPL10LQ96L21 214 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms