RNA–Protein interactions for RNA: ENST00000593008.1

DDX39A-220, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 538 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-220ENST00000593008 PEX5P50542 639 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 CDH6P55285 790 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 COG7P83436 770 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 SATB1Q01826 763 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 SEMA3BQ13214 749 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 CCINQ13939 588 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 DPYSL3Q14195 570 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 TMEM196Q5HYL7 178 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 EFHC2Q5JST6 749 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 BRMS1LQ5PSV4 323 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 LY6G5CQ5SRR4 150 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 MEI1Q5TIA1 1274 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 MANEALQ5VSG8 457 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 NUGGCQ68CJ6 796 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 PKN3Q6P5Z2 889 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 C1orf228Q6PIY5 440 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 MFSD7Q6UXD7 560 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 NYAP1Q6ZVC0 841 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 HTR3DQ70Z44 454 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 SND1Q7KZF4 910 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDX39A-220ENST00000593008 TFAP2DQ7Z6R9 452 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 ZSCAN30Q86W11 494 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 DDX42Q86XP3 938 aaKnown RBP eCLIP9.95□□□□□ -0.82
DDX39A-220ENST00000593008 ADGRG2Q8IZP9 1017 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 RNF10Q8N5U6 811 aaKnown RBP9.95□□□□□ -0.82
DDX39A-220ENST00000593008 OR52K2Q8NGK3 314 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 TSC1Q92574 1164 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 HES6Q96HZ4 224 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 POLR3BQ9NW08 1133 aaPredicted RBP9.95□□□□□ -0.82
DDX39A-220ENST00000593008 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.95□□□□□ -0.827e-6■□□□□ 10.1
DDX39A-220ENST00000593008 CWC15Q9P013 229 aaKnown RBP9.95□□□□□ -0.82
DDX39A-220ENST00000593008 STIM2Q9P246 746 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 USP34Q70CQ2 3546 aa9.95□□□□□ -0.82
DDX39A-220ENST00000593008 WDR87Q6ZQQ6 2873 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 E2F8A0AVK6 867 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 E9PAM4 449 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 SLC9A3R1O14745 358 aaPredicted RBP9.94□□□□□ -0.82
DDX39A-220ENST00000593008 PSTPIP1O43586 416 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 KIF5CO60282 957 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 F9P00740 461 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 PYGMP11217 842 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 IL4RP24394 825 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 NBL1P41271 181 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 SLC1A1P43005 524 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 SLC6A11P48066 632 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 SEC13P55735 322 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 DYNLT1P63172 113 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 AMPD2Q01433 879 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 NR1H3Q13133 447 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 DHCR24Q15392 516 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 DPYSL2Q16555 572 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 DGKKQ5KSL6 1271 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 ERMARDQ5T6L9 678 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 FYB2Q5VWT5 728 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 RWDD4Q6NW29 188 aaKnown RBP9.94□□□□□ -0.82
DDX39A-220ENST00000593008 RHBDF2Q6PJF5 856 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 SYT10Q6XYQ8 523 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 B4GALNT4Q76KP1 1039 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 RHOT1Q8IXI2 618 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 FAM217AQ8IXS0 508 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 TXLNBQ8N3L3 684 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 NPWQ8N729 165 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 PQLC3Q8N755 202 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 NAT16Q8N8M0 369 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 ATP6V0D2Q8N8Y2 350 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 EZH1Q92800 747 aaPredicted RBP9.94□□□□□ -0.82
DDX39A-220ENST00000593008 HAUS1Q96CS2 278 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 BTN2A3PQ96KV6 586 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 RPRD1AQ96P16 312 aaPredicted RBP9.94□□□□□ -0.82
DDX39A-220ENST00000593008 CSPG4P5Q96PW8 444 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 ALS2CR12Q96Q35 445 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 FAM118BQ9BPY3 351 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 CALN1Q9BXU9 219 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 PRMT8Q9NR22 394 aaPredicted RBP9.94□□□□□ -0.82
DDX39A-220ENST00000593008 ZNF212Q9UDV6 495 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 STOML2Q9UJZ1 356 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 LSM7Q9UK45 103 aaKnown RBP9.94□□□□□ -0.82
DDX39A-220ENST00000593008 AMFRQ9UKV5 643 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 CACNA1IQ9P0X4 2223 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 MYOFQ9NZM1 2061 aa9.94□□□□□ -0.82
DDX39A-220ENST00000593008 NEDD8-MDP1E9PL57 170 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 EEF2KO00418 725 aaKnown RBP9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ZNF185O15231 689 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 TBL1XO60907 577 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 RNF40O75150 1001 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ADH1CP00326 375 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ADH5P11766 374 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 AMPD1P23109 780 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 KDELR1P24390 212 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 HOXD9P28356 352 aaPredicted RBP9.93□□□□□ -0.82
DDX39A-220ENST00000593008 OPRD1P41143 372 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 CXCL12P48061 93 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 SLC11A2P49281 568 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 KDSRQ06136 332 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 DMWDQ09019 674 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 DPYSQ14117 519 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 KRT81Q14533 505 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 IFI16Q16666 785 aaKnown RBP9.93□□□□□ -0.82
DDX39A-220ENST00000593008 ANO4Q32M45 955 aa9.93□□□□□ -0.82
DDX39A-220ENST00000593008 FSCBQ5H9T9 825 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms