RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 TRIM33Q9UPN9 1127 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 FNDC1Q4ZHG4 1894 aaPredicted RBP16.15■□□□□ 0.18
MBD1-227ENST00000592060 ARHGEF37A1IGU5 675 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 TNFRSF10BO14763 440 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 KIF3CO14782 793 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 EPHB2P29323 1055 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 SPANXN3Q5MJ09 141 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 ARTNQ5T4W7 220 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 ZNF449Q6P9G9 518 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 RTN4RL1Q86UN2 441 aaPredicted RBP16.15■□□□□ 0.18
MBD1-227ENST00000592060 NDUFAF2Q8N183 169 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 OR52K1Q8NGK4 314 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 ZSCAN18Q8TBC5 510 aaPredicted RBP16.15■□□□□ 0.18
MBD1-227ENST00000592060 RGS18Q9NS28 235 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 RNF186Q9NXI6 227 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 SIRPGQ9P1W8 387 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 TRHDEQ9UKU6 1024 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 NOD1Q9Y239 953 aa16.15■□□□□ 0.18
MBD1-227ENST00000592060 CABYRO75952 493 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 ALDH1A1P00352 501 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 CYP2C18P33260 490 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 ACLYP53396 1101 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 SLC5A3P53794 718 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 SNCBQ16143 134 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 CES4AQ5XG92 561 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 KIF2BQ8N4N8 673 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 ARMC2Q8NEN0 867 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 ACMSDQ8TDX5 336 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 LINC01599Q8WXQ3 324 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 CDKL2Q92772 493 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 HHIPL1Q96JK4 782 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 MECRQ9BV79 373 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 TRIM55Q9BYV6 548 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 SLC13A1Q9BZW2 595 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 KCNK13Q9HB14 408 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 PSAT1Q9Y617 370 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 NUMBLQ9Y6R0 609 aa16.14■□□□□ 0.17
MBD1-227ENST00000592060 ERI2A8K979 691 aaKnown RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 KRT16P08779 473 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 HOXC13P31276 330 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 DSC1Q08554 894 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 RIPK1Q13546 671 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 FRG1Q14331 258 aaKnown RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 TEX44Q53QW1 395 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 MAP3K21Q5TCX8 1036 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 MANEALQ5VSG8 457 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 TRIM42Q8IWZ5 723 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 KLHDC8BQ8IXV7 354 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 FCRL3Q96P31 734 aaPredicted RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 AGAP3Q96P47 875 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 VAT1Q99536 393 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 SMOC2Q9H3U7 446 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 DCTN4Q9UJW0 460 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 ATP5HO75947 161 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 DDHD2O94830 711 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 ATP6V1G2O95670 118 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 ALDOAP04075 364 aaKnown RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 DLDP09622 509 aaKnown RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 T-ENOLP0DO92 83 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 CKBP12277 381 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 NFKB1P19838 968 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 PGFP49763 221 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 YWHAHQ04917 246 aaPredicted RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 MBTPS1Q14703 1052 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 CLLU1OSQ5K130 101 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 BRMS1LQ5PSV4 323 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 ITPRIPL1Q6GPH6 555 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 C4orf50Q6ZRC1 276 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 SCD5Q86SK9 330 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 RASSF3Q86WH2 238 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 SPATA2LQ8IUW3 424 aaPredicted RBP16.13■□□□□ 0.17
MBD1-227ENST00000592060 STKLD1Q8NE28 680 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 CERS2Q96G23 380 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 PGLYRP2Q96PD5 576 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 TSGA13Q96PP4 275 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 LRMDAQ9H2I8 198 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 ABCC13Q9NSE7 274 aa16.13■□□□□ 0.17
MBD1-227ENST00000592060 NYNRINQ9P2P1 1898 aaKnown RBP16.12■□□□□ 0.17
MBD1-227ENST00000592060 TMEM189-UBE2V1I3L0A0 370 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 USP12O75317 370 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 TOP3BO95985 862 aaKnown RBP16.12■□□□□ 0.17
MBD1-227ENST00000592060 POLBP06746 335 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 NEFHP12036 1026 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 ZNF33AQ06730 810 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 STXBP5Q5T5C0 1151 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 CES3Q6UWW8 571 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 ZNF280BQ86YH2 543 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 ARHGAP12Q8IWW6 846 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 RAB3IL1Q8TBN0 382 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 RNF34Q969K3 372 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 CELF6Q96J87 481 aaKnown RBP16.12■□□□□ 0.17
MBD1-227ENST00000592060 TEKT5Q96M29 485 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 C7orf26Q96N11 449 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 HAPLN3Q96S86 360 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 LRRC40Q9H9A6 602 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 EMCNQ9ULC0 261 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 VANGL2Q9ULK5 521 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 RPS6KL1Q9Y6S9 549 aa16.12■□□□□ 0.17
MBD1-227ENST00000592060 VWA8A3KMH1 1905 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms